fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06740.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034000 not found in 149aa AT3G06740.1 not_1st 0.547244094 II
Pt033999 not found in 153aa AT3G06740.1 not_1st 0.539370078 II
Pt041905 not found in 138aa AT3G06740.1 not_1st 0.523622047 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G06740.1     MLDPTEKVIDSESMESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAG
pt034000_POPTR_ MLDPCE----RQGSES---------EEMSSKSLETESPQKKTCADCGTSKTPLWRGGPAG
pt033999_POPTR_ MLSSVSLIVFQQGSES---------EEMSSKSLETESPQKKTCADCGTSKTPLWRGGPAG
pt041905_POPTR_ MLDPAN-----KGSES---------EEMSSNSQETESPLKKTCADCGTSKTPLWRGGPAG
                **.. .     :. **         *. **.* *: *  **:** ***************

AT3G06740.1     PKSLCNACGIRNRKKRRTLIS-NRS----EDKKKKS----------HNRNPKFGDSLKQR
pt034000_POPTR_ PKSLCNACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSSNYNNNNKQLGDGLKQR
pt033999_POPTR_ PKSLCNACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSSNYNNNNKQLGDGLKQR
pt041905_POPTR_ PKSLCNACGIRSRKKKRDILGLNKG--AANDKRAKKGSNNNGSSN-NNNNKQLGDGSKQR
                ***********.***:* ::. *:.    :**: *.          :*.* ::**. ***

AT3G06740.1     LMELGREVMMQRSTAENQRRNKLGEEEQAAVLLMALSYASSVYA
pt034000_POPTR_ LLALGREVLVQGSTVE-RRRRKLGEEEQAAVLLMALSYG-SVYA
pt033999_POPTR_ LLALGREVLVQGSTVE-RRRRKLGEEEQAAVLLMALSYG-SVYA
pt041905_POPTR_ LLALGREVLMQ--------RRKLGEEEQAAVLLMALSYG-SVYA
                *: *****::*        *.*****************. ****
BoxShade v3.31 C (beta, 970507) Output
AT3G06740.1     M L D P T E K V I D S E S M E S K L T S V D A I E E H S S S S S N E A I S N E K K S C A I C G T S K T P L W R G G P A G
pt034000_POPTR_    M L D P C E - - - - R Q G S E S - - - - - - - - - E E M S S K S L E T E S P Q K K T C A D C G T S K T P L W R G G P A G
pt033999_POPTR_    M L S S V S L I V F Q Q G S E S - - - - - - - - - E E M S S K S L E T E S P Q K K T C A D C G T S K T P L W R G G P A G
pt041905_POPTR_    M L D P A N - - - - - K G S E S - - - - - - - - - E E M S S N S Q E T E S P L K K T C A D C G T S K T P L W R G G P A G
 
AT3G06740.1     P K S L C N A C G I R N R K K R R T L I S - N R S - - - - E D K K K K S - - - - - - - - - - H N R N P K F G D S L K Q R
pt034000_POPTR_    P K S L C N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S N Y N N N N K Q L G D G L K Q R
pt033999_POPTR_    P K S L C N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S N Y N N N N K Q L G D G L K Q R
pt041905_POPTR_    P K S L C N A C G I R S R K K K R D I L G L N K G - - A A N D K R A K K G S N N N G S S N - N N N N K Q L G D G S K Q R
 
AT3G06740.1     L M E L G R E V M M Q R S T A E N Q R R N K L G E E E Q A A V L L M A L S Y A S S V Y A
pt034000_POPTR_    L L A L G R E V L V Q G S T V E - R R R R K L G E E E Q A A V L L M A L S Y G - S V Y A
pt033999_POPTR_    L L A L G R E V L V Q G S T V E - R R R R K L G E E E Q A A V L L M A L S Y G - S V Y A
pt041905_POPTR_    L L A L G R E V L M Q - - - - - - - - R R K L G E E E Q A A V L L M A L S Y G - S V Y A
 
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