fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06740.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm019345 not found in 130aa AT5G49300.1 not_not 0.405511811 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06740.1     MLDPTEK-----VIDSESMESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWR
gm019345_Glyma0 MVDPTGKGSEIEVEDSNSNPNAPSS-----GNSPSSNNE----QKKTCADCGTTKTPLWR
                *:*** *     * **:*  .  :*      :*.**.**    :**:** ***:******

AT3G06740.1     GGPAGPKSLCNACGIRNRKKRRTLI-----SNRSEDKKKKSHNRNPKFGDSLKQRLMELG
gm019345_Glyma0 GGPAGPKSLCNACGIRSRKKKRAILGINKGSNEDGRKGKRTGG--------------ALG
                ****************.***:*:::     **..  * *:: .               **

AT3G06740.1     REVMMQRSTAENQRRNKLGEEEQAAVLLMALSYASSVYA
gm019345_Glyma0 KEVLLHRS-----HWKKLGEEEKAAVLLMSLSYG-SVYA
                :**:::**     : :******:******:***. ****
BoxShade v3.31 C (beta, 970507) Output
AT3G06740.1     M L D P T E K - - - - - V I D S E S M E S K L T S V D A I E E H S S S S S N E A I S N E K K S C A I C G T S K T P L W R
gm019345_Glyma0    M V D P T G K G S E I E V E D S N S N P N A P S S - - - - - G N S P S S N N E - - - - Q K K T C A D C G T T K T P L W R
 
AT3G06740.1     G G P A G P K S L C N A C G I R N R K K R R T L I - - - - - S N R S E D K K K K S H N R N P K F G D S L K Q R L M E L G
gm019345_Glyma0    G G P A G P K S L C N A C G I R S R K K K R A I L G I N K G S N E D G R K G K R T G G - - - - - - - - - - - - - - A L G
 
AT3G06740.1     R E V M M Q R S T A E N Q R R N K L G E E E Q A A V L L M A L S Y A S S V Y A
gm019345_Glyma0    K E V L L H R S - - - - - H W K K L G E E E K A A V L L M S L S Y G - S V Y A
 
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