fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06740.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os015688 not found in 136aa AT3G06740.1 1st_1st 0.393700787 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06740.1     MLDPTEKVIDSESMESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAG
Os015688_Os03t0 --------MDSSSVEKGSGSIDPDERTASG--------EPKACTDCHTTKTPLWRGGPSG
                        :**.*:*.   *:*. *. :*.        * *:*: * *:*********:*

AT3G06740.1     PKSLCNACGIRNRKKRRTLI--------SNRSEDKKKKSHNRNPKFGDSLKQRLMELGRE
Os015688_Os03t0 PKSLCNACGIRYRKKRREALGLDAGEGGAERQE-KKKSKRERGEEV--TMELRMVGFGKE
                *********** *****  :        ::*.* ***..::*. :.  ::: *:: :*:*

AT3G06740.1     VMMQRSTAENQRRNKLGEEEQAAVLLMALSYASSVYA
Os015688_Os03t0 VVLKQRR-RMRRRRRLGEEEKAAILLMALS-SGVIYA
                *::::   . :**.:*****:**:****** :. :**
BoxShade v3.31 C (beta, 970507) Output
AT3G06740.1     M L D P T E K V I D S E S M E S K L T S V D A I E E H S S S S S N E A I S N E K K S C A I C G T S K T P L W R G G P A G
Os015688_Os03t0    - - - - - - - - M D S S S V E K G S G S I D P D E R T A S G - - - - - - - - E P K A C T D C H T T K T P L W R G G P S G
 
AT3G06740.1     P K S L C N A C G I R N R K K R R T L I - - - - - - - - S N R S E D K K K K S H N R N P K F G D S L K Q R L M E L G R E
Os015688_Os03t0    P K S L C N A C G I R Y R K K R R E A L G L D A G E G G A E R Q E - K K K S K R E R G E E V - - T M E L R M V G F G K E
 
AT3G06740.1     V M M Q R S T A E N Q R R N K L G E E E Q A A V L L M A L S Y A S S V Y A
Os015688_Os03t0    V V L K Q R R - R M R R R R R L G E E E K A A I L L M A L S - S G V I Y A
 
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