fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06740.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os015688 not found in 136aa AT3G06740.1 1st_1st 0.393700787 Ib
Gm045841 not found in 140aa AT3G06740.1 1st_1st 0.409448818 Ia
Gm019345 not found in 130aa AT5G49300.1 not_not 0.405511811 III
Pt034001 not found in 139aa AT3G06740.1 1st_1st 0.547244094 Ia
Pt034000 not found in 149aa AT3G06740.1 not_1st 0.547244094 II
Pt033999 not found in 153aa AT3G06740.1 not_1st 0.539370078 II
Pt041905 not found in 138aa AT3G06740.1 not_1st 0.523622047 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G06740.1     MLDPTEKVIDSESMESKLTSVDAIEE-HSSSSSNEAISNEKKSCAICGTSKTPLWRGGPA
gm019345_Glyma0 MVDPTG-----KGSEIEVEDSNSNPNAPSSGNSPSSNNEQKKTCADCGTTKTPLWRGGPA
pt034001_POPTR_ MLDPCE----RQGSESE----------EMSSKSLETESPQKKTCADCGTSKTPLWRGGPA
Os015688_Os03t0 -MDSSS---VEKGS-------------GSIDPDERTASGEPKACTDCHTTKTPLWRGGPS
pt033999_POPTR_ MLSSVSLIVFQQGSESE----------EMSSKSLETESPQKKTCADCGTSKTPLWRGGPA
pt041905_POPTR_ MLDPAN-----KGSESE----------EMSSNSQETESPLKKTCADCGTSKTPLWRGGPA
pt034000_POPTR_ MLDPCE----RQGSESE----------EMSSKSLETESPQKKTCADCGTSKTPLWRGGPA
gm045841_Glyma1 MVDPTG-----KGSEVEVEDSNSNPNAPSSGNSPSSNNEQKKTCADCGTTKTPLWRGGPA
                 :..       :.                 . .  : .   *:*: * *:*********:

AT3G06740.1     GPKSLCNACGIRNRKKRRTLIS-NRS----EDKKKKS----------HNRNPKFGDSLKQ
gm019345_Glyma0 GPKSLCNACGIRSRKKKRAILGINKG--SNEDGRKGKRT----------------GG---
pt034001_POPTR_ GPKSLCNACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSS----------DGLKQ
Os015688_Os03t0 GPKSLCNACGIRYRKKRREALGLDAGEGGAERQEKKKSKRERGEEV----------TMEL
pt033999_POPTR_ GPKSLCNACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSSNYNNNNKQLGDGLKQ
pt041905_POPTR_ GPKSLCNACGIRSRKKKRDILGLNKG--AANDKRAKKGSNNNGSSN-NNNNKQLGDGSKQ
pt034000_POPTR_ GPKSLCNACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSSNYNNNNKQLGDGLKQ
gm045841_Glyma1 GPKSLCNACGIRSRKKKRAILGINKG--STEDGRKGKRTGGGGGIG------GIGGG---
                ************ ***:*  :. : .    :  .  .                       

AT3G06740.1     RLMELGREVMMQRSTAENQRRNKLGEEEQAAVLLMALSYASSVYA
gm019345_Glyma0 ---ALGKEVLLHRSH-----WKKLGEEEKAAVLLMSLSYG-SVYA
pt034001_POPTR_ RLLALGREVLVQGSTVE-RRRRKLGEEEQAAVLLMALSYG-SVYA
Os015688_Os03t0 RMVGFGKEVVLKQRRRM-RRRRRLGEEEKAAILLMALSSG-VIYA
pt033999_POPTR_ RLLALGREVLVQGSTVE-RRRRKLGEEEQAAVLLMALSYG-SVYA
pt041905_POPTR_ RLLALGREVLMQ--------RRKLGEEEQAAVLLMALSYG-SVYA
pt034000_POPTR_ RLLALGREVLVQGSTVE-RRRRKLGEEEQAAVLLMALSYG-SVYA
gm045841_Glyma1 ---ALGREVLLHRSH-----WKKLGEEEKAAVLLMSLSYG-SVYA
                    :*:**:::         .:*****:**:***:** .  :**
BoxShade v3.31 C (beta, 970507) Output
AT3G06740.1     M L D P T E K V I D S E S M E S K L T S V D A I E E - H S S S S S N E A I S N E K K S C A I C G T S K T P L W R G G P A
gm019345_Glyma0    M V D P T G - - - - - K G S E I E V E D S N S N P N A P S S G N S P S S N N E Q K K T C A D C G T T K T P L W R G G P A
pt034001_POPTR_    M L D P C E - - - - R Q G S E S E - - - - - - - - - - E M S S K S L E T E S P Q K K T C A D C G T S K T P L W R G G P A
Os015688_Os03t0    - M D S S S - - - V E K G S - - - - - - - - - - - - - G S I D P D E R T A S G E P K A C T D C H T T K T P L W R G G P S
pt033999_POPTR_    M L S S V S L I V F Q Q G S E S E - - - - - - - - - - E M S S K S L E T E S P Q K K T C A D C G T S K T P L W R G G P A
pt041905_POPTR_    M L D P A N - - - - - K G S E S E - - - - - - - - - - E M S S N S Q E T E S P L K K T C A D C G T S K T P L W R G G P A
pt034000_POPTR_    M L D P C E - - - - R Q G S E S E - - - - - - - - - - E M S S K S L E T E S P Q K K T C A D C G T S K T P L W R G G P A
gm045841_Glyma1    M V D P T G - - - - - K G S E V E V E D S N S N P N A P S S G N S P S S N N E Q K K T C A D C G T T K T P L W R G G P A
 
AT3G06740.1     G P K S L C N A C G I R N R K K R R T L I S - N R S - - - - E D K K K K S - - - - - - - - - - H N R N P K F G D S L K Q
gm019345_Glyma0    G P K S L C N A C G I R S R K K K R A I L G I N K G - - S N E D G R K G K R T - - - - - - - - - - - - - - - - G G - - -
pt034001_POPTR_    G P K S L C N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S - - - - - - - - - - D G L K Q
Os015688_Os03t0    G P K S L C N A C G I R Y R K K R R E A L G L D A G E G G A E R Q E K K K S K R E R G E E V - - - - - - - - - - T M E L
pt033999_POPTR_    G P K S L C N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S N Y N N N N K Q L G D G L K Q
pt041905_POPTR_    G P K S L C N A C G I R S R K K K R D I L G L N K G - - A A N D K R A K K G S N N N G S S N - N N N N K Q L G D G S K Q
pt034000_POPTR_    G P K S L C N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S N Y N N N N K Q L G D G L K Q
gm045841_Glyma1    G P K S L C N A C G I R S R K K K R A I L G I N K G - - S T E D G R K G K R T G G G G G I G - - - - - - G I G G G - - -
 
AT3G06740.1     R L M E L G R E V M M Q R S T A E N Q R R N K L G E E E Q A A V L L M A L S Y A S S V Y A
gm019345_Glyma0    - - - A L G K E V L L H R S H - - - - - W K K L G E E E K A A V L L M S L S Y G - S V Y A
pt034001_POPTR_    R L L A L G R E V L V Q G S T V E - R R R R K L G E E E Q A A V L L M A L S Y G - S V Y A
Os015688_Os03t0    R M V G F G K E V V L K Q R R R M - R R R R R L G E E E K A A I L L M A L S S G - V I Y A
pt033999_POPTR_    R L L A L G R E V L V Q G S T V E - R R R R K L G E E E Q A A V L L M A L S Y G - S V Y A
pt041905_POPTR_    R L L A L G R E V L M Q - - - - - - - - R R K L G E E E Q A A V L L M A L S Y G - S V Y A
pt034000_POPTR_    R L L A L G R E V L V Q G S T V E - R R R R K L G E E E Q A A V L L M A L S Y G - S V Y A
gm045841_Glyma1    - - - A L G R E V L L H R S H - - - - - W K K L G E E E K A A V L L M S L S Y G - S V Y A
 
0