fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G06740.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034001 not found in 139aa AT3G06740.1 1st_1st 0.547244094 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G06740.1     MLDPTEKVIDSESMESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAG
pt034001_POPTR_ MLDPCERQ-GSES------------EEMSSKSLETESPQKKTCADCGTSKTPLWRGGPAG
                **** *:  .***            *. **.* *: * :**:** ***************

AT3G06740.1     PKSLCNACGIRNRKKRRTLIS-NR----SEDKKKKSHNRNPKFGDSLKQRLMELGREVMM
pt034001_POPTR_ PKSLCNACGIRSRKKKRDILGLNKGGAAANDKRAKKGSTNNGSSDGLKQRLLALGREVLV
                ***********.***:* ::. *:    ::**: *. . *   .*.*****: *****::

AT3G06740.1     QRSTAENQRRNKLGEEEQAAVLLMALSYASSVYA
pt034001_POPTR_ QGSTVE-RRRRKLGEEEQAAVLLMALSYG-SVYA
                * **.* :**.*****************. ****
BoxShade v3.31 C (beta, 970507) Output
AT3G06740.1     M L D P T E K V I D S E S M E S K L T S V D A I E E H S S S S S N E A I S N E K K S C A I C G T S K T P L W R G G P A G
pt034001_POPTR_    M L D P C E R Q - G S E S - - - - - - - - - - - - E E M S S K S L E T E S P Q K K T C A D C G T S K T P L W R G G P A G
 
AT3G06740.1     P K S L C N A C G I R N R K K R R T L I S - N R - - - - S E D K K K K S H N R N P K F G D S L K Q R L M E L G R E V M M
pt034001_POPTR_    P K S L C N A C G I R S R K K K R D I L G L N K G G A A A N D K R A K K G S T N N G S S D G L K Q R L L A L G R E V L V
 
AT3G06740.1     Q R S T A E N Q R R N K L G E E E Q A A V L L M A L S Y A S S V Y A
pt034001_POPTR_    Q G S T V E - R R R R K L G E E E Q A A V L L M A L S Y G - S V Y A
 
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