Input
| Putative repression domain
|
|
AT3G06740.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm045841 |
not found in 140aa |
AT3G06740.1 |
1st_1st |
0.409448818 |
Ia |
Gm019345 |
not found in 130aa |
AT5G49300.1 |
not_not |
0.405511811 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT3G06740.1 MLDPTEKVIDSESMESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAG
gm045841_Glyma1 MVDPTGKGSEVEVEDSNSNPNAPSSGNSPSSNNE----QKKTCADCGTTKTPLWRGGPAG
gm019345_Glyma0 MVDPTGKGSEIEVEDSNSNPNAPSSGNSPSSNNE----QKKTCADCGTTKTPLWRGGPAG
*:*** * : * :*: .. . . :*.**.** :**:** ***:***********
AT3G06740.1 PKSLCNACGIRNRKKRRTLI---SNRSEDKKKKSHNRNPKF-----GDSLKQRLMELGRE
gm045841_Glyma1 PKSLCNACGIRSRKKKRAILGINKGSTEDGRKGKRTGGGGGIGGIGGGA-------LGRE
gm019345_Glyma0 PKSLCNACGIRSRKKKRAILGINKGSNEDGRKGKRT----------GGA-------LGKE
***********.***:*::: .. .** :* .:. *.: **:*
AT3G06740.1 VMMQRSTAENQRRNKLGEEEQAAVLLMALSYASSVYA
gm045841_Glyma1 VLLHRS-----HWKKLGEEEKAAVLLMSLSYG-SVYA
gm019345_Glyma0 VLLHRS-----HWKKLGEEEKAAVLLMSLSYG-SVYA
*:::** : :******:******:***. ****
BoxShade v3.31 C (beta, 970507) Output
AT3G06740.1 |
M |
L |
D |
P |
T |
E |
K |
V |
I |
D |
S |
E |
S |
M |
E |
S |
K |
L |
T |
S |
V |
D |
A |
I |
E |
E |
H |
S |
S |
S |
S |
S |
N |
E |
A |
I |
S |
N |
E |
K |
K |
S |
C |
A |
I |
C |
G |
T |
S |
K |
T |
P |
L |
W |
R |
G |
G |
P |
A |
G |
gm045841_Glyma1 |
M |
V |
D |
P |
T |
G |
K |
G |
S |
E |
V |
E |
V |
E |
D |
S |
N |
S |
N |
P |
N |
A |
P |
S |
S |
G |
N |
S |
P |
S |
S |
N |
N |
E |
- |
- |
- |
- |
Q |
K |
K |
T |
C |
A |
D |
C |
G |
T |
T |
K |
T |
P |
L |
W |
R |
G |
G |
P |
A |
G |
gm019345_Glyma0 |
M |
V |
D |
P |
T |
G |
K |
G |
S |
E |
I |
E |
V |
E |
D |
S |
N |
S |
N |
P |
N |
A |
P |
S |
S |
G |
N |
S |
P |
S |
S |
N |
N |
E |
- |
- |
- |
- |
Q |
K |
K |
T |
C |
A |
D |
C |
G |
T |
T |
K |
T |
P |
L |
W |
R |
G |
G |
P |
A |
G |
|
AT3G06740.1 |
P |
K |
S |
L |
C |
N |
A |
C |
G |
I |
R |
N |
R |
K |
K |
R |
R |
T |
L |
I |
- |
- |
- |
S |
N |
R |
S |
E |
D |
K |
K |
K |
K |
S |
H |
N |
R |
N |
P |
K |
F |
- |
- |
- |
- |
- |
G |
D |
S |
L |
K |
Q |
R |
L |
M |
E |
L |
G |
R |
E |
gm045841_Glyma1 |
P |
K |
S |
L |
C |
N |
A |
C |
G |
I |
R |
S |
R |
K |
K |
K |
R |
A |
I |
L |
G |
I |
N |
K |
G |
S |
T |
E |
D |
G |
R |
K |
G |
K |
R |
T |
G |
G |
G |
G |
G |
I |
G |
G |
I |
G |
G |
G |
A |
- |
- |
- |
- |
- |
- |
- |
L |
G |
R |
E |
gm019345_Glyma0 |
P |
K |
S |
L |
C |
N |
A |
C |
G |
I |
R |
S |
R |
K |
K |
K |
R |
A |
I |
L |
G |
I |
N |
K |
G |
S |
N |
E |
D |
G |
R |
K |
G |
K |
R |
T |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
G |
G |
A |
- |
- |
- |
- |
- |
- |
- |
L |
G |
K |
E |
|
AT3G06740.1 |
V |
M |
M |
Q |
R |
S |
T |
A |
E |
N |
Q |
R |
R |
N |
K |
L |
G |
E |
E |
E |
Q |
A |
A |
V |
L |
L |
M |
A |
L |
S |
Y |
A |
S |
S |
V |
Y |
A |
gm045841_Glyma1 |
V |
L |
L |
H |
R |
S |
- |
- |
- |
- |
- |
H |
W |
K |
K |
L |
G |
E |
E |
E |
K |
A |
A |
V |
L |
L |
M |
S |
L |
S |
Y |
G |
- |
S |
V |
Y |
A |
gm019345_Glyma0 |
V |
L |
L |
H |
R |
S |
- |
- |
- |
- |
- |
H |
W |
K |
K |
L |
G |
E |
E |
E |
K |
A |
A |
V |
L |
L |
M |
S |
L |
S |
Y |
G |
- |
S |
V |
Y |
A |
|
|