fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G07220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049547 not found in 199aa AT3G07220.1 not_1st 0.414551607 II
Sm014699 not found in 299aa AT3G07260.1 1st_not 0.446700507 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G07220.1     MATAVGGGSDVEVGFAKLQGEDFEYYMQSYSIILGRNSKKATVDVDLSSLGGGMNISRNH
Sm014699_Selmo1 -------MGELEAGFAKLQGEDFEYYMQTYSIILGRNSKKSTVDVDLASMGGGMNISRQH
gm049547_Glyma1 MSTAAAAGGDMEAGFAKLQGEDFEYYMQTYSIVLGRNSKKSTVDVDLSSLGGGMNISRHH
                        .::*.***************:***:*******:******:*:********:*

AT3G07220.1     ARIFYDFTRRRFSLEVLGKNGCLVEGVLHLPGNPNVKLDSQDLLQIGDKEFYFLLPVRSI
Sm014699_Selmo1 ARIYYDFGRKRFALEVLSKNGCYVEGVLYLRGTSHVKLDSQDLLQIGEKKFYFLLPTKQI
gm049547_Glyma1 ARIFYDFARRRFALEVLGKNGCLVEGVLHLPGNPPVKLDSQDLLQIGDKEFYFLLPVRSI
                ***:*** *:**:****.**** *****:* *.. ************:*:******.:.*

AT3G07220.1     -LGGPLGPRHHVSGQT--SVVP-YHNYQSGPGSG-SGKKGVRSRELY--EYDDEDDDDDD
Sm014699_Selmo1 SIAKPTPPP--PPLTT--MVAP-APIALAAPGGGSSGKKRSK-------QSKAEDG----
gm049547_Glyma1 -LGGPVGPRHYPNHATPGPVVPHYNNYHLGP--G-PVKKAPR-REYYEEEFDDEDD----
                 :. *  *       *   *.*       .*  * . **  :       : . **.    

AT3G07220.1     DEEDDMRGSGKKTRRDGHE-VVYASGEKKREGRSKVDREADD-QQFLQLEEKDVVSSVAT
Sm014699_Selmo1 ----SSRKESKKRKSAGGEAAALSAAAAMQAGLSIASGSSEKPPPYTSAEEREVVAAIGS
gm049547_Glyma1 -------VGGRKMRRDGYDGYGYAGGK----------------------------SSLSA
                         .:* :  * :    :..                             :::.:

AT3G07220.1     VLSDLCGPGEWMPMEKLHSVILKEYGNVWHHSRVRRYLSQEDWAIPEAK-----GKPWYG
Sm014699_Selmo1 VLSDLCGPGEWMPIVELFNEVLKSLNAICSPAKV--------WKVVEVKTEEDGARPWDG
gm049547_Glyma1 ------------PMG---------------------------------------------
                            *:                                              

AT3G07220.1     LLMLLRKYPEHFVINTRSKGRVTLEFVSLVTLLS
Sm014699_Selmo1 LLGLLRRYPEHFIINIKTKGRQSAEYVSLVSLVS
gm049547_Glyma1 ----------------------------------
BoxShade v3.31 C (beta, 970507) Output
AT3G07220.1     M A T A V G G G S D V E V G F A K L Q G E D F E Y Y M Q S Y S I I L G R N S K K A T V D V D L S S L G G G M N I S R N H
Sm014699_Selmo1    - - - - - - - M G E L E A G F A K L Q G E D F E Y Y M Q T Y S I I L G R N S K K S T V D V D L A S M G G G M N I S R Q H
gm049547_Glyma1    M S T A A A A G G D M E A G F A K L Q G E D F E Y Y M Q T Y S I V L G R N S K K S T V D V D L S S L G G G M N I S R H H
 
AT3G07220.1     A R I F Y D F T R R R F S L E V L G K N G C L V E G V L H L P G N P N V K L D S Q D L L Q I G D K E F Y F L L P V R S I
Sm014699_Selmo1    A R I Y Y D F G R K R F A L E V L S K N G C Y V E G V L Y L R G T S H V K L D S Q D L L Q I G E K K F Y F L L P T K Q I
gm049547_Glyma1    A R I F Y D F A R R R F A L E V L G K N G C L V E G V L H L P G N P P V K L D S Q D L L Q I G D K E F Y F L L P V R S I
 
AT3G07220.1     - L G G P L G P R H H V S G Q T - - S V V P - Y H N Y Q S G P G S G - S G K K G V R S R E L Y - - E Y D D E D D D D D D
Sm014699_Selmo1    S I A K P T P P P - - P P L T T - - M V A P - A P I A L A A P G G G S S G K K R S K - - - - - - - Q S K A E D G - - - -
gm049547_Glyma1    - L G G P V G P R H Y P N H A T P G P V V P H Y N N Y H L G P - - G - P V K K A P R - R E Y Y E E E F D D E D D - - - -
 
AT3G07220.1     D E E D D M R G S G K K T R R D G H E - V V Y A S G E K K R E G R S K V D R E A D D - Q Q F L Q L E E K D V V S S V A T
Sm014699_Selmo1    - - - - S S R K E S K K R K S A G G E A A A L S A A A A M Q A G L S I A S G S S E K P P P Y T S A E E R E V V A A I G S
gm049547_Glyma1    - - - - - - - V G G R K M R R D G Y D G Y G Y A G G K - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S L S A
 
AT3G07220.1     V L S D L C G P G E W M P M E K L H S V I L K E Y G N V W H H S R V R R Y L S Q E D W A I P E A K - - - - - G K P W Y G
Sm014699_Selmo1    V L S D L C G P G E W M P I V E L F N E V L K S L N A I C S P A K V - - - - - - - - W K V V E V K T E E D G A R P W D G
gm049547_Glyma1    - - - - - - - - - - - - P M G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G07220.1     L L M L L R K Y P E H F V I N T R S K G R V T L E F V S L V T L L S
Sm014699_Selmo1    L L G L L R R Y P E H F I I N I K T K G R Q S A E Y V S L V S L V S
gm049547_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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