fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G07220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039904 not found in 316aa AT3G07220.1 1st_1st 0.776649746 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G07220.1     MATAVGGGSDVEVGFAKLQGEDFEYYMQSYSIILGRNSKKATVDVDLSSLGGGMNISRNH
pt039904_POPTR_ MGAT---GSDVEAGFAKLQGEDFEYYMQTYSIILGRNSKKSTVDVDLSSLGGGMNISRHH
                *.::   *****.***************:***********:*****************:*

AT3G07220.1     ARIFYDFTRRRFSLEVLGKNGCLVEGVLHLPGNPNVKLDSQDLLQIGDKEFYFLLPVRSI
pt039904_POPTR_ ARIFYDFTRRRFALEVLGKNGCLVEGVLHLPGNPPVKLDSQDLLQIGDKEFYFLLPVRSI
                ************:********************* *************************

AT3G07220.1     LGGPLGPRHHVSGQTSVVPYHNYQS-------GPGSGSGKKGVRSRELYEYDDEDDDDDD
pt039904_POPTR_ LGGALAPRHHV----AVVPQYGYHSGGADRMVGPVSVATVKKGRAREFYE------EEFD
                ***.*.*****    :*** :.*:*       ** * :  *  *:**:**      :: *

AT3G07220.1     DEED--DMRGSGKKTRRDGHEVVYASGEKKREGRSKVDREADDQQFLQLEEKDVVSSVAT
pt039904_POPTR_ DEEDVGGSGGGGKKMRREGYEGYGYGREKKMEGRSRIDRESDNQQLLQLEEKDVVSSVAT
                ****  .  *.*** **:*:*    . *** ****::***:*:**:**************

AT3G07220.1     VLSDLCGPGEWMPMEKLHSVILKEYGNVWHHSRVRRYLSQEDWAIPEAKGKPWYGLLMLL
pt039904_POPTR_ VLSDLCGPGEWMPMEKLHAELVEQYSSIWHHSRVRRYLTSEDWTGPEAKGKPWYGLLMLL
                ******************: ::::*..:**********:.***: ***************

AT3G07220.1     RKYPEHFVINTRSKGRVTLEFVSLVTLLS
pt039904_POPTR_ RKYPEHFVINTRSKGRVTLEFVSLVSLLT
                *************************:**:
BoxShade v3.31 C (beta, 970507) Output
AT3G07220.1     M A T A V G G G S D V E V G F A K L Q G E D F E Y Y M Q S Y S I I L G R N S K K A T V D V D L S S L G G G M N I S R N H
pt039904_POPTR_    M G A T - - - G S D V E A G F A K L Q G E D F E Y Y M Q T Y S I I L G R N S K K S T V D V D L S S L G G G M N I S R H H
 
AT3G07220.1     A R I F Y D F T R R R F S L E V L G K N G C L V E G V L H L P G N P N V K L D S Q D L L Q I G D K E F Y F L L P V R S I
pt039904_POPTR_    A R I F Y D F T R R R F A L E V L G K N G C L V E G V L H L P G N P P V K L D S Q D L L Q I G D K E F Y F L L P V R S I
 
AT3G07220.1     L G G P L G P R H H V S G Q T S V V P Y H N Y Q S - - - - - - - G P G S G S G K K G V R S R E L Y E Y D D E D D D D D D
pt039904_POPTR_    L G G A L A P R H H V - - - - A V V P Q Y G Y H S G G A D R M V G P V S V A T V K K G R A R E F Y E - - - - - - E E F D
 
AT3G07220.1     D E E D - - D M R G S G K K T R R D G H E V V Y A S G E K K R E G R S K V D R E A D D Q Q F L Q L E E K D V V S S V A T
pt039904_POPTR_    D E E D V G G S G G G G K K M R R E G Y E G Y G Y G R E K K M E G R S R I D R E S D N Q Q L L Q L E E K D V V S S V A T
 
AT3G07220.1     V L S D L C G P G E W M P M E K L H S V I L K E Y G N V W H H S R V R R Y L S Q E D W A I P E A K G K P W Y G L L M L L
pt039904_POPTR_    V L S D L C G P G E W M P M E K L H A E L V E Q Y S S I W H H S R V R R Y L T S E D W T G P E A K G K P W Y G L L M L L
 
AT3G07220.1     R K Y P E H F V I N T R S K G R V T L E F V S L V T L L S
pt039904_POPTR_    R K Y P E H F V I N T R S K G R V T L E F V S L V S L L T
 
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