fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G07260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm014699 not found in 299aa AT3G07260.1 1st_1st 0.3875 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G07260.1     MATAVGSGSDVEVGFAKLQGEDFEYYMQSYSIILGRNSKKSTVDVDLSSLGGGMNISRNH
Sm014699_Selmo1 -------MGELEAGFAKLQGEDFEYYMQTYSIILGRNSKKSTVDVDLASMGGGMNISRQH
                        .::*.***************:******************:*:********:*

AT3G07260.1     ARIFYDFTRRRFSLEVLGKNGCFVEGVLHLPGNPNVKLDSQDLLQIGDKEFYFLLPVWSI
Sm014699_Selmo1 ARIYYDFGRKRFALEVLSKNGCYVEGVLYLRGTSHVKLDSQDLLQIGEKKFYFLLPTKQI
                ***:*** *:**:****.****:*****:* *..:************:*:******. .*

AT3G07260.1     -LGGPLGPRHHVLGKATVVPYHNYHSGPGSG-SGKNGVRSRELYEYDDEDDDEEEDIRGS
Sm014699_Selmo1 SIAKPTPPPPPL--TTMVAPAPIALAAPGGGSSGKK--RSKQSKAEDGSSRKESKKRKSA
                 :. *  *   :  .: *.*     :.**.* ***:  **::    *... .*.:. :.:

AT3G07260.1     GKK--------TWRDGHEGVYASGEKKREGRSKADRE--ADDQQFLQLMHGSG-------
Sm014699_Selmo1 GGEAAALSAAAAMQAGLSIASGSSEKPPPYTSAEEREVVAAIGSVLSDLCGPGEWMPIVE
                * :        : : * . . .*.**     *  :**  *   ..*. : *.*       

AT3G07260.1     ------------------WSVTDIK-------------GVWKRM-----------ASQSS
Sm014699_Selmo1 LFNEVLKSLNAICSPAKVWKVVEVKTEEDGARPWDGLLGLLRRYPEHFIINIKTKGRQSA
                                  *.*.::*             *: :*            . **:

AT3G07260.1     KKIPITRRLGYP
Sm014699_Selmo1 EYVSLVSLVS--
                : :.:.  :.
BoxShade v3.31 C (beta, 970507) Output
AT3G07260.1     M A T A V G S G S D V E V G F A K L Q G E D F E Y Y M Q S Y S I I L G R N S K K S T V D V D L S S L G G G M N I S R N H
Sm014699_Selmo1    - - - - - - - M G E L E A G F A K L Q G E D F E Y Y M Q T Y S I I L G R N S K K S T V D V D L A S M G G G M N I S R Q H
 
AT3G07260.1     A R I F Y D F T R R R F S L E V L G K N G C F V E G V L H L P G N P N V K L D S Q D L L Q I G D K E F Y F L L P V W S I
Sm014699_Selmo1    A R I Y Y D F G R K R F A L E V L S K N G C Y V E G V L Y L R G T S H V K L D S Q D L L Q I G E K K F Y F L L P T K Q I
 
AT3G07260.1     - L G G P L G P R H H V L G K A T V V P Y H N Y H S G P G S G - S G K N G V R S R E L Y E Y D D E D D D E E E D I R G S
Sm014699_Selmo1    S I A K P T P P P P P L - - T T M V A P A P I A L A A P G G G S S G K K - - R S K Q S K A E D G S S R K E S K K R K S A
 
AT3G07260.1     G K K - - - - - - - - T W R D G H E G V Y A S G E K K R E G R S K A D R E - - A D D Q Q F L Q L M H G S G - - - - - - -
Sm014699_Selmo1    G G E A A A L S A A A A M Q A G L S I A S G S S E K P P P Y T S A E E R E V V A A I G S V L S D L C G P G E W M P I V E
 
AT3G07260.1     - - - - - - - - - - - - - - - - - - W S V T D I K - - - - - - - - - - - - - G V W K R M - - - - - - - - - - - A S Q S S
Sm014699_Selmo1    L F N E V L K S L N A I C S P A K V W K V V E V K T E E D G A R P W D G L L G L L R R Y P E H F I I N I K T K G R Q S A
 
AT3G07260.1     K K I P I T R R L G Y P
Sm014699_Selmo1    E Y V S L V S L V S - -
 
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