fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G07260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt039904 not found in 316aa AT3G07220.1 1st_not 0.58125 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G07260.1     MATAVGSGSDVEVGFAKLQGEDFEYYMQSYSIILGRNSKKSTVDVDLSSLGGGMNISRNH
pt039904_POPTR_ MG---ATGSDVEAGFAKLQGEDFEYYMQTYSIILGRNSKKSTVDVDLSSLGGGMNISRHH
                *.   .:*****.***************:*****************************:*

AT3G07260.1     ARIFYDFTRRRFSLEVLGKNGCFVEGVLHLPGNPNVKLDSQDLLQIGDKEFYFLLPVWSI
pt039904_POPTR_ ARIFYDFTRRRFALEVLGKNGCLVEGVLHLPGNPPVKLDSQDLLQIGDKEFYFLLPVRSI
                ************:*********:*********** ********************** **

AT3G07260.1     LGGPLGPRHHVLGKATVVPYHNYHS-------GPGSGSGKNGVRSRELYEYDDEDDDEEE
pt039904_POPTR_ LGGALAPRHHV----AVVPQYGYHSGGADRMVGPVSVATVKKGRAREFYE---EEFDDEE
                ***.*.*****    :*** :.***       ** * :  :  *:**:**   *: *:**

AT3G07260.1     DIRGS---GKKTWRDGHEGVYASGEKKREGRSKADREADDQQFLQL--------------
pt039904_POPTR_ DVGGSGGGGKKMRREGYEGYGYGREKKMEGRSRIDRESDNQQLLQLEEKDVVSSVATVLS
                *: **   ***  *:*:**   . *** ****: ***:*:**:***              

AT3G07260.1     -MHGSG-WS---------VTDIKGVW------KRMASQ-----SSKKIP------ITRRL
pt039904_POPTR_ DLCGPGEWMPMEKLHAELVEQYSSIWHHSRVRRYLTSEDWTGPEAKGKPWYGLLMLLRK-
                 : *.* *          * : ..:*      : ::*:     .:*  *      : *: 

AT3G07260.1     GYP-------------------------
pt039904_POPTR_ -YPEHFVINTRSKGRVTLEFVSLVSLLT
                 **
BoxShade v3.31 C (beta, 970507) Output
AT3G07260.1     M A T A V G S G S D V E V G F A K L Q G E D F E Y Y M Q S Y S I I L G R N S K K S T V D V D L S S L G G G M N I S R N H
pt039904_POPTR_    M G - - - A T G S D V E A G F A K L Q G E D F E Y Y M Q T Y S I I L G R N S K K S T V D V D L S S L G G G M N I S R H H
 
AT3G07260.1     A R I F Y D F T R R R F S L E V L G K N G C F V E G V L H L P G N P N V K L D S Q D L L Q I G D K E F Y F L L P V W S I
pt039904_POPTR_    A R I F Y D F T R R R F A L E V L G K N G C L V E G V L H L P G N P P V K L D S Q D L L Q I G D K E F Y F L L P V R S I
 
AT3G07260.1     L G G P L G P R H H V L G K A T V V P Y H N Y H S - - - - - - - G P G S G S G K N G V R S R E L Y E Y D D E D D D E E E
pt039904_POPTR_    L G G A L A P R H H V - - - - A V V P Q Y G Y H S G G A D R M V G P V S V A T V K K G R A R E F Y E - - - E E F D D E E
 
AT3G07260.1     D I R G S - - - G K K T W R D G H E G V Y A S G E K K R E G R S K A D R E A D D Q Q F L Q L - - - - - - - - - - - - - -
pt039904_POPTR_    D V G G S G G G G K K M R R E G Y E G Y G Y G R E K K M E G R S R I D R E S D N Q Q L L Q L E E K D V V S S V A T V L S
 
AT3G07260.1     - M H G S G - W S - - - - - - - - - V T D I K G V W - - - - - - K R M A S Q - - - - - S S K K I P - - - - - - I T R R L
pt039904_POPTR_    D L C G P G E W M P M E K L H A E L V E Q Y S S I W H H S R V R R Y L T S E D W T G P E A K G K P W Y G L L M L L R K -
 
AT3G07260.1     G Y P - - - - - - - - - - - - - - - - - - - - - - - - -
pt039904_POPTR_    - Y P E H F V I N T R S K G R V T L E F V S L V S L L T
 
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