fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G07260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049547 not found in 199aa AT3G07220.1 not_not 0.51875 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G07260.1     MATAVGSGSDVEVGFAKLQGEDFEYYMQSYSIILGRNSKKSTVDVDLSSLGGGMNISRNH
gm049547_Glyma1 MSTAAAAGGDMEAGFAKLQGEDFEYYMQTYSIVLGRNSKKSTVDVDLSSLGGGMNISRHH
                *:**..:*.*:*.***************:***:*************************:*

AT3G07260.1     ARIFYDFTRRRFSLEVLGKNGCFVEGVLHLPGNPNVKLDSQDLLQIGDKEFYFLLPVWSI
gm049547_Glyma1 ARIFYDFARRRFALEVLGKNGCLVEGVLHLPGNPPVKLDSQDLLQIGDKEFYFLLPVRSI
                *******:****:*********:*********** ********************** **

AT3G07260.1     LGGPLGPRHHVLGKAT---VVP-YHNYHSGPGSGSGKNGVRSRELYEYDDEDDDEEEDIR
gm049547_Glyma1 LGGPVGPRHYP-NHATPGPVVPHYNNYHLGPGP------VKKAPRREYYEEEFDDEDDV-
                ****:****:  .:**   *** *:*** ***.      *:.    ** :*: *:*:*: 

AT3G07260.1     GSGKKTWRDGHEGV-YASGEKKREGRSKADREADDQQFLQLMHGSGWSVTDIKGVWKRMA
gm049547_Glyma1 -GGRKMRRDGYDGYGYAGG-----------------------------------------
                 .*:*  ***::*  **.*                                         

AT3G07260.1     SQSSKKIPITRRLGYP
gm049547_Glyma1 -KSSLSAPMG------
                 :** . *:
BoxShade v3.31 C (beta, 970507) Output
AT3G07260.1     M A T A V G S G S D V E V G F A K L Q G E D F E Y Y M Q S Y S I I L G R N S K K S T V D V D L S S L G G G M N I S R N H
gm049547_Glyma1    M S T A A A A G G D M E A G F A K L Q G E D F E Y Y M Q T Y S I V L G R N S K K S T V D V D L S S L G G G M N I S R H H
 
AT3G07260.1     A R I F Y D F T R R R F S L E V L G K N G C F V E G V L H L P G N P N V K L D S Q D L L Q I G D K E F Y F L L P V W S I
gm049547_Glyma1    A R I F Y D F A R R R F A L E V L G K N G C L V E G V L H L P G N P P V K L D S Q D L L Q I G D K E F Y F L L P V R S I
 
AT3G07260.1     L G G P L G P R H H V L G K A T - - - V V P - Y H N Y H S G P G S G S G K N G V R S R E L Y E Y D D E D D D E E E D I R
gm049547_Glyma1    L G G P V G P R H Y P - N H A T P G P V V P H Y N N Y H L G P G P - - - - - - V K K A P R R E Y Y E E E F D D E D D V -
 
AT3G07260.1     G S G K K T W R D G H E G V - Y A S G E K K R E G R S K A D R E A D D Q Q F L Q L M H G S G W S V T D I K G V W K R M A
gm049547_Glyma1    - G G R K M R R D G Y D G Y G Y A G G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G07260.1     S Q S S K K I P I T R R L G Y P
gm049547_Glyma1    - K S S L S A P M G - - - - - -
 
0