fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G07260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm023379 not found in 319aa AT3G07220.1 1st_not 0.541666666 II
Gm049547 not found in 199aa AT3G07220.1 not_not 0.51875 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G07260.1     MATAVGSGSDVEVGFAKLQGEDFEYYMQSYSIILGRNSKKSTVDVDLSSLGGGMNISRNH
gm049547_Glyma1 MSTAAAAGGDMEAGFAKLQGEDFEYYMQTYSIVLGRNSKKSTVDVDLSSLGGGMNISRHH
gm023379_Glyma0 MST-AAAGGDVEAGFAKLQGEDFEYYMQTYSIVLGRNSKKSTVDVDLSSLGGGMNISRHH
                *:* ..:*.*:*.***************:***:*************************:*

AT3G07260.1     ARIFYDFTRRRFSLEVLGKNGCFVEGVLHLPGNPNVKLDSQDLLQIGDKEFYFLLPVWSI
gm049547_Glyma1 ARIFYDFARRRFALEVLGKNGCLVEGVLHLPGNPPVKLDSQDLLQIGDKEFYFLLPVRSI
gm023379_Glyma0 ARIFYDFARRRFALEVLGKNGCLVEGVLHLPGNPPVKLDSQDLLQIGDKEFYFLLPVRSI
                *******:****:*********:*********** ********************** **

AT3G07260.1     LGGPLGPRHHV--LGKATVVP-YHNYHSGPGSGSGKNGVRSRELYEYDDEDDDEEEDIRG
gm049547_Glyma1 LGGPVGPRHYPNHATPGPVVPHYNNYHLGPGP------VKKAPRREYYEEEFDDEDDV--
gm023379_Glyma0 LVGPVGPRHYPNHAAPGPVVPHYNNYHLGPGP------VKKAPRREYYEEEFDDEDDV--
                * **:****:      ..*** *:*** ***.      *:.    ** :*: *:*:*:  

AT3G07260.1     SGKKTWRDGHEGV-YASGEK--------KREGRSKADREADDQQFLQL------------
gm049547_Glyma1 GGRKMRRDGYDGYGYAGGKSSLSAPMG---------------------------------
gm023379_Glyma0 GGRKMRRDGYDGYGYAGGKSSLSAPMDKKSEGRSRVDRDADNLQLQQLEEKDVVSSVATV
                .*:*  ***::*  **.*:.                                        

AT3G07260.1     ---MHGSG-WS---------VTDIKGVW------KRMASQ-----SSKKIP------ITR
gm049547_Glyma1 ------------------------------------------------------------
gm023379_Glyma0 LSDLCGPGEWMPMEKLHTELLEQYSSVWHHNRVRRYLTSEDWPGPESKGKPWYGLLMLLR
                                                                            

AT3G07260.1     RLGYP-------------------------
gm049547_Glyma1 ------------------------------
gm023379_Glyma0 K--YPEHFVINTRSKGRVTLEFVSLVSLIS
BoxShade v3.31 C (beta, 970507) Output
AT3G07260.1     M A T A V G S G S D V E V G F A K L Q G E D F E Y Y M Q S Y S I I L G R N S K K S T V D V D L S S L G G G M N I S R N H
gm049547_Glyma1    M S T A A A A G G D M E A G F A K L Q G E D F E Y Y M Q T Y S I V L G R N S K K S T V D V D L S S L G G G M N I S R H H
gm023379_Glyma0    M S T - A A A G G D V E A G F A K L Q G E D F E Y Y M Q T Y S I V L G R N S K K S T V D V D L S S L G G G M N I S R H H
 
AT3G07260.1     A R I F Y D F T R R R F S L E V L G K N G C F V E G V L H L P G N P N V K L D S Q D L L Q I G D K E F Y F L L P V W S I
gm049547_Glyma1    A R I F Y D F A R R R F A L E V L G K N G C L V E G V L H L P G N P P V K L D S Q D L L Q I G D K E F Y F L L P V R S I
gm023379_Glyma0    A R I F Y D F A R R R F A L E V L G K N G C L V E G V L H L P G N P P V K L D S Q D L L Q I G D K E F Y F L L P V R S I
 
AT3G07260.1     L G G P L G P R H H V - - L G K A T V V P - Y H N Y H S G P G S G S G K N G V R S R E L Y E Y D D E D D D E E E D I R G
gm049547_Glyma1    L G G P V G P R H Y P N H A T P G P V V P H Y N N Y H L G P G P - - - - - - V K K A P R R E Y Y E E E F D D E D D V - -
gm023379_Glyma0    L V G P V G P R H Y P N H A A P G P V V P H Y N N Y H L G P G P - - - - - - V K K A P R R E Y Y E E E F D D E D D V - -
 
AT3G07260.1     S G K K T W R D G H E G V - Y A S G E K - - - - - - - - K R E G R S K A D R E A D D Q Q F L Q L - - - - - - - - - - - -
gm049547_Glyma1    G G R K M R R D G Y D G Y G Y A G G K S S L S A P M G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm023379_Glyma0    G G R K M R R D G Y D G Y G Y A G G K S S L S A P M D K K S E G R S R V D R D A D N L Q L Q Q L E E K D V V S S V A T V
 
AT3G07260.1     - - - M H G S G - W S - - - - - - - - - V T D I K G V W - - - - - - K R M A S Q - - - - - S S K K I P - - - - - - I T R
gm049547_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm023379_Glyma0    L S D L C G P G E W M P M E K L H T E L L E Q Y S S V W H H N R V R R Y L T S E D W P G P E S K G K P W Y G L L M L L R
 
AT3G07260.1     R L G Y P - - - - - - - - - - - - - - - - - - - - - - - - -
gm049547_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm023379_Glyma0    K - - Y P E H F V I N T R S K G R V T L E F V S L V S L I S
 
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