fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G07500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016866 not found in 241aa AT2G43280.1 not_not 0.416445623 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G07500.1     -----MEGNS------------------------LPEEDVEMMENSDVMKTVTDEASPMV
gm016866_Glyma0 MESQLVDGNDDMGVSGDVGLSTYEVQMHQETYEVDPNEECRVLESSSGGEVGICDDHAIQ
                     ::**.                         *:*: .::*.*.  :.   :  .: 

AT3G07500.1     EPFIGMEFESEEAAKSFYDNYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFRRS-R
gm016866_Glyma0 EPYEGMEFESEDAAKIFYDEYARRLGFVMRVMSCRRSERDGRILARRLGCNKEGYCVSIR
                **: *******:*** ***:**  :****** : *** *** :: *** *****:  * *

AT3G07500.1     PRRSESRKPRAITREGCKALIVVKREKSGTWLVTKFEKEHNHPLLPLSPNVRRNFQLPQT
gm016866_Glyma0 GKFSSVRKPRASTREGCKAMIHIKYNKSGKWVITKFVKDHNHPLV-VSPREAR-----QT
                 : *. ***** *******:* :* :***.*::*** *:*****: :**.  *     **

AT3G07500.1     PDEKDAKIRELSAELSRERRRCTALQQQLDMVLKEMEEHSNHLTININSVIQSVRDIESN
gm016866_Glyma0 MDEKDKKIQELTAELRHKKRLCATYQEQLTSFMKIVEEHNEKLSAKIHHVVNNLKEFESI
                 **** **:**:*** :::* *:: *:**  .:* :***.::*: :*: *::.::::** 

AT3G07500.1     TFTKQQT
gm016866_Glyma0 EELLHQT
                    :**
BoxShade v3.31 C (beta, 970507) Output
AT3G07500.1     - - - - - M E G N S - - - - - - - - - - - - - - - - - - - - - - - - L P E E D V E M M E N S D V M K T V T D E A S P M V
gm016866_Glyma0    M E S Q L V D G N D D M G V S G D V G L S T Y E V Q M H Q E T Y E V D P N E E C R V L E S S S G G E V G I C D D H A I Q
 
AT3G07500.1     E P F I G M E F E S E E A A K S F Y D N Y A T C M G F V M R V D A F R R S M R D G T V V W R R L V C N K E G F R R S - R
gm016866_Glyma0    E P Y E G M E F E S E D A A K I F Y D E Y A R R L G F V M R V M S C R R S E R D G R I L A R R L G C N K E G Y C V S I R
 
AT3G07500.1     P R R S E S R K P R A I T R E G C K A L I V V K R E K S G T W L V T K F E K E H N H P L L P L S P N V R R N F Q L P Q T
gm016866_Glyma0    G K F S S V R K P R A S T R E G C K A M I H I K Y N K S G K W V I T K F V K D H N H P L V - V S P R E A R - - - - - Q T
 
AT3G07500.1     P D E K D A K I R E L S A E L S R E R R R C T A L Q Q Q L D M V L K E M E E H S N H L T I N I N S V I Q S V R D I E S N
gm016866_Glyma0    M D E K D K K I Q E L T A E L R H K K R L C A T Y Q E Q L T S F M K I V E E H N E K L S A K I H H V V N N L K E F E S I
 
AT3G07500.1     T F T K Q Q T
gm016866_Glyma0    E E L L H Q T
 
0