fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G07500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt016097 not found in 171aa AT3G07500.1 1st_1st 0.464190981 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G07500.1     MEGNSLPE-------EDVEM---MENSDVMKTVTDEASPMVEPFIGMEFESEEAAKSFYD
pt016097_POPTR_ MSQSQMDENASASMSEDGDMDQIVESSNGKELAISEASSDMEPCVGMEFESEEAAKVFYD
                *. ..: *       ** :*   :*.*:  : . .***. :** :*********** ***

AT3G07500.1     NYATCMGFVMRVDAFRRSMRDGTVVWRRLVCNKEGFRRSRPRRSESRKPRAITREGCKAL
pt016097_POPTR_ AYATHVGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKLRPRRSENRKPRAVTREGCKAM
                 *** :**:*************.**************: ******.*****:*******:

AT3G07500.1     IVVKREKSGTWLVTKFEKEHNHPLLPLSPNVRRNFQLPQTPDEKDAKIRELSAELSRERR
pt016097_POPTR_ IVVKKEKAGKWVVTRFVKEHNHPLVPTPANGRRTVLLSQTP-------------------
                ****:**:*.*:**:* *******:* ..* **.. *.***                   

AT3G07500.1     RCTALQQQLDMVLKEMEEHSNHLTININSVIQSVRDIESNTFTKQQT
pt016097_POPTR_ -----------------------------ILLSVIVLEC--------
                                             :: **  :*.
BoxShade v3.31 C (beta, 970507) Output
AT3G07500.1     M E G N S L P E - - - - - - - E D V E M - - - M E N S D V M K T V T D E A S P M V E P F I G M E F E S E E A A K S F Y D
pt016097_POPTR_    M S Q S Q M D E N A S A S M S E D G D M D Q I V E S S N G K E L A I S E A S S D M E P C V G M E F E S E E A A K V F Y D
 
AT3G07500.1     N Y A T C M G F V M R V D A F R R S M R D G T V V W R R L V C N K E G F R R S R P R R S E S R K P R A I T R E G C K A L
pt016097_POPTR_    A Y A T H V G F I M R V D A F R R S M R D G K V V W R R L V C N K E G F R K L R P R R S E N R K P R A V T R E G C K A M
 
AT3G07500.1     I V V K R E K S G T W L V T K F E K E H N H P L L P L S P N V R R N F Q L P Q T P D E K D A K I R E L S A E L S R E R R
pt016097_POPTR_    I V V K K E K A G K W V V T R F V K E H N H P L V P T P A N G R R T V L L S Q T P - - - - - - - - - - - - - - - - - - -
 
AT3G07500.1     R C T A L Q Q Q L D M V L K E M E E H S N H L T I N I N S V I Q S V R D I E S N T F T K Q Q T
pt016097_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I L L S V I V L E C - - - - - - - -
 
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