fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G07650.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017260 not found in 379aa AT5G48250.1 1st_not 0.556534508 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G07650.1     MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC
pt017260_POPTR_ MGYVCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSKRHSRTLLCERCNSQPALVRC
                ***:******************.*******.***************:*****:*** ***

AT3G07650.1     VEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLD
pt017260_POPTR_ AEERISLCQNCDWIGH---------GTSTSASTHRRQTINSYSGCPSASELSSIWSFVLD
                .***:******** **         .:***.. *:****..******:***:***** **

AT3G07650.1     LA--GQSICEQELGMMNIDDDGPTDKKTCNED-------------------KKDVLVGSS
pt017260_POPTR_ FPSRGESTCEQELGLMSIAENSTTDSWGPTENTIGQNASGVVEVNDRREIAKSGVWLGSS
                :.  *:* ******:*.* ::..**.   .*:                   *..* :***

AT3G07650.1     SIPETSSVPQG--KSSSAKDVGMCEDDFYGNLGMDEVDMALENYEELFGTAFNPSEELFG
pt017260_POPTR_ SIPESSSVPNNLDQTTRSANTSLPKD-----FNMDEMDLSLENYEELFGVTLNNSEELLE
                ****:****:.  ::: : :..: :*     :.***:*::*********.::* ****: 

AT3G07650.1     HGGIDSLFHKHQTAPEGGNSVQPAGSN----DSFMSSKTEPIICFASKPAHSNISFSGVT
pt017260_POPTR_ NGGIDSLFGTKDMSVV--NAVQPASSNAASADSMMSNKTEPILCFTEKQGHSSLSFSGLN
                :******* .:: :    *:****.**    **:**.*****:**:.* .**.:****:.

AT3G07650.1     GESSAGDFQECGASSSIQLSGEPPWYPPTLQDNNACSH----SVTRNNAVMRYKEKKKAR
pt017260_POPTR_ VESSAADYQDCGASSML-LMGEPPWCPP-------CPESPFSSANRSDAVMRYKEKKKTR
                 ****.*:*:***** : * ***** **       *..    *..*.:**********:*

AT3G07650.1     KFDKRVRYASRKARADVRRRVKGRFVKAGEAYDYDPLTPTRSY
pt017260_POPTR_ MFEKKVRYASRKARADVRRRVKGRFVKAGEAYDYDPLSQTRSF
                 *:*:********************************: ***:
BoxShade v3.31 C (beta, 970507) Output
AT3G07650.1     M G Y M C D F C G E Q R S M V Y C R S D A A C L C L S C D R S V H S A N A L S K R H S R T L V C E R C N A Q P A T V R C
pt017260_POPTR_    M G Y V C D F C G E Q R S M V Y C R S D A A S L C L S C D R N V H S A N A L S K R H S R T L L C E R C N S Q P A L V R C
 
AT3G07650.1     V E E R V S L C Q N C D W S G H N N S N N N N S S S S S T S P Q Q H K R Q T I S C Y S G C P S S S E L A S I W S F C L D
pt017260_POPTR_    A E E R I S L C Q N C D W I G H - - - - - - - - - G T S T S A S T H R R Q T I N S Y S G C P S A S E L S S I W S F V L D
 
AT3G07650.1     L A - - G Q S I C E Q E L G M M N I D D D G P T D K K T C N E D - - - - - - - - - - - - - - - - - - - K K D V L V G S S
pt017260_POPTR_    F P S R G E S T C E Q E L G L M S I A E N S T T D S W G P T E N T I G Q N A S G V V E V N D R R E I A K S G V W L G S S
 
AT3G07650.1     S I P E T S S V P Q G - - K S S S A K D V G M C E D D F Y G N L G M D E V D M A L E N Y E E L F G T A F N P S E E L F G
pt017260_POPTR_    S I P E S S S V P N N L D Q T T R S A N T S L P K D - - - - - F N M D E M D L S L E N Y E E L F G V T L N N S E E L L E
 
AT3G07650.1     H G G I D S L F H K H Q T A P E G G N S V Q P A G S N - - - - D S F M S S K T E P I I C F A S K P A H S N I S F S G V T
pt017260_POPTR_    N G G I D S L F G T K D M S V V - - N A V Q P A S S N A A S A D S M M S N K T E P I L C F T E K Q G H S S L S F S G L N
 
AT3G07650.1     G E S S A G D F Q E C G A S S S I Q L S G E P P W Y P P T L Q D N N A C S H - - - - S V T R N N A V M R Y K E K K K A R
pt017260_POPTR_    V E S S A A D Y Q D C G A S S M L - L M G E P P W C P P - - - - - - - C P E S P F S S A N R S D A V M R Y K E K K K T R
 
AT3G07650.1     K F D K R V R Y A S R K A R A D V R R R V K G R F V K A G E A Y D Y D P L T P T R S Y
pt017260_POPTR_    M F E K K V R Y A S R K A R A D V R R R V K G R F V K A G E A Y D Y D P L S Q T R S F
 
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