fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G08500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051145 not found in 336aa AT3G08500.1 1st_1st 0.386764705 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G08500.1     MMMRKPDITTIRDKGKPNHACGGNNNKPKLRKGLWSPDEDEKLIRYMLTNGQGCWSDIAR
gm051145_Glyma1 --MRKPDMM---GKDKIN-----NNIKSKLRKGLWSPEEDEKLLRYMITKGQGCWSDIAR
                  *****:    .*.* *     ** *.*********:*****:***:*:**********

AT3G08500.1     NAGLLRCGKSCRLRWINYLRPDLKRGSFSPQEEDLIFHLHSILGNRWSQIATRLPGRTDN
gm051145_Glyma1 NAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEEVIIHLHSILGNRWSQIAARLPGRTDN
                **** *********************:******::*:**************:********

AT3G08500.1     EIKNFWNSTLKKRLKNNSNNNTSSGSSPNNSNSNSLDPRDQHVDMGGNSTSLMDDYHHDE
gm051145_Glyma1 EIKNFWNSTLKKRLKMNNNNST---LSPNNSDSSG--PKDVNV-MGG----IMSMNEHD-
                *************** *.**.*    *****:*..  *:* :* ***    :*.  .** 

AT3G08500.1     NMMTVGNTMRMDSSSPFNVGPMVNSVGLNQ--LYDPLMISVPDNGYHQM-GNT-------
gm051145_Glyma1 -LM----TMCMDSSSSTSSSSCMQSMHATNMVLTNPFPL-LPNNRYDMMTGATGFLDNMA
                 :*    ** *****. . .. ::*:  .:  * :*: : :*:* *. * * *       

AT3G08500.1     VNVFSVNGLGDYGNTI----LDPISKRVSVEGDDWFIPPSENTNVIACST-------SNN
gm051145_Glyma1 AACLTQVGMVDHDHGVVHGTLEPNKTRL---GSDFSLPPLESRSIEDNSSTPIDHVKSHN
                .  ::  *: *:.: :    *:* ..*:   *.*: :** *. .:   *:       *:*

AT3G08500.1     LNLQALDPCFNSKNLCH----SESFKVGNVLGIENGSWEIENPKIGDWDLDGLIDNNSSF
gm051145_Glyma1 NNNHFKNSCFNNTDHYHHIQSSNNVVVEDLFGFGNHG-QGENFRMGEWDLEGLMQDISYF
                 * :  :.***..:  *    *:.. * :::*: * . : ** ::*:***:**::: * *

AT3G08500.1     PFLDFQVD
gm051145_Glyma1 PSLDFQV-
                * *****
BoxShade v3.31 C (beta, 970507) Output
AT3G08500.1     M M M R K P D I T T I R D K G K P N H A C G G N N N K P K L R K G L W S P D E D E K L I R Y M L T N G Q G C W S D I A R
gm051145_Glyma1    - - M R K P D M M - - - G K D K I N - - - - - N N I K S K L R K G L W S P E E D E K L L R Y M I T K G Q G C W S D I A R
 
AT3G08500.1     N A G L L R C G K S C R L R W I N Y L R P D L K R G S F S P Q E E D L I F H L H S I L G N R W S Q I A T R L P G R T D N
gm051145_Glyma1    N A G L Q R C G K S C R L R W I N Y L R P D L K R G A F S P Q E E E V I I H L H S I L G N R W S Q I A A R L P G R T D N
 
AT3G08500.1     E I K N F W N S T L K K R L K N N S N N N T S S G S S P N N S N S N S L D P R D Q H V D M G G N S T S L M D D Y H H D E
gm051145_Glyma1    E I K N F W N S T L K K R L K M N N N N S T - - - L S P N N S D S S G - - P K D V N V - M G G - - - - I M S M N E H D -
 
AT3G08500.1     N M M T V G N T M R M D S S S P F N V G P M V N S V G L N Q - - L Y D P L M I S V P D N G Y H Q M - G N T - - - - - - -
gm051145_Glyma1    - L M - - - - T M C M D S S S S T S S S S C M Q S M H A T N M V L T N P F P L - L P N N R Y D M M T G A T G F L D N M A
 
AT3G08500.1     V N V F S V N G L G D Y G N T I - - - - L D P I S K R V S V E G D D W F I P P S E N T N V I A C S T - - - - - - - S N N
gm051145_Glyma1    A A C L T Q V G M V D H D H G V V H G T L E P N K T R L - - - G S D F S L P P L E S R S I E D N S S T P I D H V K S H N
 
AT3G08500.1     L N L Q A L D P C F N S K N L C H - - - - S E S F K V G N V L G I E N G S W E I E N P K I G D W D L D G L I D N N S S F
gm051145_Glyma1    N N N H F K N S C F N N T D H Y H H I Q S S N N V V V E D L F G F G N H G - Q G E N F R M G E W D L E G L M Q D I S Y F
 
AT3G08500.1     P F L D F Q V D
gm051145_Glyma1    P S L D F Q V -
 
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