fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G08505.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020883 not found in 384aa AT3G08505.1 1st_not 0.706070287 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G08505.2     MSDRILCKFFVHGSCLKGENCEFSHDSKDPPNNVCTFYQKRICLYGSRCRYDHVR-----
pt020883_POPTR_ MSKRLLCKFFAHGACLKGEHCEFSHDWKDPPNNICTFYQKGICVYGSRCRYDHVKPSRPE
                **.*:*****.**:*****:****** ******:****** **:**********:     

AT3G08505.2     --AASNLP-LSSDSESL---DRSIS-----------------------TTPSRHLQQ-QG
pt020883_POPTR_ STASSSLTVLASTSVSLALPARTVSSGVRTVLAVPPELSASSRPFIAPSTPAWDLESVQL
                  *:*.*. *:* * **    *::*                       :**: .*:. * 

AT3G08505.2     DN-NDGD----KSSNVYCIHPREYPICSFAAAGDCPRGNQCPHMHGDLCNTCGKKCLHPF
pt020883_POPTR_ DFLEDGDGEVIQPRNV---KPADRSLCSFAAAGSCPRGDKCPHIHGDLCAYCGKHCLHPF
                *  :***    :. **   :* : .:*******.****::***:*****  ***:*****

AT3G08505.2     RPEEREEHTKECEKKQKHIEALKQSQDIECSVCLDRILSKATPGERKFGLLTECDHPFCI
pt020883_POPTR_ RPDERNEHLKACEKKQKNLDLLKYSQEIECSVCLDRVLSKLTAAERKFGLLSECNHPFCI
                **:**:** * ******::: ** **:*********:*** *..*******:**:*****

AT3G08505.2     QCIRNWRSSAPVSGMDVNSTLRACPICRKLSYFVVPSVVWYSSPEEKKEIIDIYKAKLRS
pt020883_POPTR_ SCIRNWRGSSPTSGMDVNSSLRACPICRKLSYFVIPSVIWYSTKEEKQEIVDTYKEKLRS
                .******.*:*.*******:**************:***:***: ***:**:* ** ****

AT3G08505.2     IDCKHFNFGNGNCPFGASCFYKHAYSDGHLEEVVLRHLGSQEGETVITDSIRLSEFLGGL
pt020883_POPTR_ IDCKHFDFGNGNCPFGTSCFYKHAYRDGRLEEVVLRHLGAEDGQGVIAKNIRLSDFLGGL
                ******:*********:******** **:**********:::*: **:..****:*****

AT3G08505.2     QIF------------------------
pt020883_POPTR_ QIRSSIFGAKPSCLQGWLSGGDSISGS
                **
BoxShade v3.31 C (beta, 970507) Output
AT3G08505.2     M S D R I L C K F F V H G S C L K G E N C E F S H D S K D P P N N V C T F Y Q K R I C L Y G S R C R Y D H V R - - - - -
pt020883_POPTR_    M S K R L L C K F F A H G A C L K G E H C E F S H D W K D P P N N I C T F Y Q K G I C V Y G S R C R Y D H V K P S R P E
 
AT3G08505.2     - - A A S N L P - L S S D S E S L - - - D R S I S - - - - - - - - - - - - - - - - - - - - - - - T T P S R H L Q Q - Q G
pt020883_POPTR_    S T A S S S L T V L A S T S V S L A L P A R T V S S G V R T V L A V P P E L S A S S R P F I A P S T P A W D L E S V Q L
 
AT3G08505.2     D N - N D G D - - - - K S S N V Y C I H P R E Y P I C S F A A A G D C P R G N Q C P H M H G D L C N T C G K K C L H P F
pt020883_POPTR_    D F L E D G D G E V I Q P R N V - - - K P A D R S L C S F A A A G S C P R G D K C P H I H G D L C A Y C G K H C L H P F
 
AT3G08505.2     R P E E R E E H T K E C E K K Q K H I E A L K Q S Q D I E C S V C L D R I L S K A T P G E R K F G L L T E C D H P F C I
pt020883_POPTR_    R P D E R N E H L K A C E K K Q K N L D L L K Y S Q E I E C S V C L D R V L S K L T A A E R K F G L L S E C N H P F C I
 
AT3G08505.2     Q C I R N W R S S A P V S G M D V N S T L R A C P I C R K L S Y F V V P S V V W Y S S P E E K K E I I D I Y K A K L R S
pt020883_POPTR_    S C I R N W R G S S P T S G M D V N S S L R A C P I C R K L S Y F V I P S V I W Y S T K E E K Q E I V D T Y K E K L R S
 
AT3G08505.2     I D C K H F N F G N G N C P F G A S C F Y K H A Y S D G H L E E V V L R H L G S Q E G E T V I T D S I R L S E F L G G L
pt020883_POPTR_    I D C K H F D F G N G N C P F G T S C F Y K H A Y R D G R L E E V V L R H L G A E D G Q G V I A K N I R L S D F L G G L
 
AT3G08505.2     Q I F - - - - - - - - - - - - - - - - - - - - - - - -
pt020883_POPTR_    Q I R S S I F G A K P S C L Q G W L S G G D S I S G S
 
0