fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G08505.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027762 not found in 508aa AT3G08505.1 1st_not 0.560702875 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G08505.2     ---------------------------------------------------------MSD
Sb027762_Sorbi1 PAEARGGRKGPDEAARCTDRPNPRRSAGVTTAAKTGASRRLGVPEVVDGAARSASSSMSR
                                                                         ** 

AT3G08505.2     RILCKFFVHGSCLKGENCEFSHDSKDPPNNVCTFYQKRICLYGSRCRYDHVRAASNLP--
Sb027762_Sorbi1 RVPCKFFLHGACFKGDYCEFSHDCNDQPDNVCTFYQKGACSFGSRCRNEHVEAHRDCPQP
                *: ****:**:*:**: ******.:* *:********  * :***** :**.*  : *  

AT3G08505.2     ------LSSDSESLDRS----------------------ISTTPSRHLQQQG----DNND
Sb027762_Sorbi1 ATTAARASPNSSQLVASSRDPRCSGCQTDMCDQTQQICKSTTTLSAHQPAWAVDYHDNDT
                       *.:*..*  *                       :** * *    .    **: 

AT3G08505.2     GDKSS---------NVYCIHPREYPICSFAAAGDCPRGNQCPHMHGDLCNTCGKKCLHPF
Sb027762_Sorbi1 PDDTTSWPSYQAVQNQTSQHPAHLSNCSSAAVGTCPYGKDCSQMHGDLCAFCERQSLNPN
                 *.::         *  . ** . . ** **.* ** *::*.:******  * ::.*:* 

AT3G08505.2     RPEEREEHTKECEKKQKHIEALKQSQDIECSVCLDRILSKATPGERKFGLLTECDHPFCI
Sb027762_Sorbi1 QPDERGVHVKLCKKNNRYLEAMRKSEDIECGVCLDRVLSKPTAAERRFGLLSDCDHSFCI
                :*:**  *.* *:*:::::**:::*:****.*****:***.*..**:****::***.***

AT3G08505.2     QCIRNWRSSAPVSGMDVNSTLRACPICRKLSYFVVPSVVWYSSPEEKKEIIDIYKAKLRS
Sb027762_Sorbi1 SCIRNWRSTSPTSGMDVNSTLRACPICRKLSYYVVPSITWYSSKEEKQEIVEGYKAKLRS
                .*******::*.********************:****:.**** ***:**:: *******

AT3G08505.2     IDCKHFNFGNGNCPFGASCFYKHAYSDGHLEEVVLRHLGSQEGETVITDSIRLSEFLGGL
Sb027762_Sorbi1 IDCKHFDFGKGTCPFGSSCFYKHAYDDGRLEDALLNHHDAEDASAAIARLMRLSYLLTRV
                ******:**:*.****:********.**:**:.:*.* .:::..:.*:  :*** :*  :

AT3G08505.2     QIF
Sb027762_Sorbi1 HV-
                ::
BoxShade v3.31 C (beta, 970507) Output
AT3G08505.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S D
Sb027762_Sorbi1    P A E A R G G R K G P D E A A R C T D R P N P R R S A G V T T A A K T G A S R R L G V P E V V D G A A R S A S S S M S R
 
AT3G08505.2     R I L C K F F V H G S C L K G E N C E F S H D S K D P P N N V C T F Y Q K R I C L Y G S R C R Y D H V R A A S N L P - -
Sb027762_Sorbi1    R V P C K F F L H G A C F K G D Y C E F S H D C N D Q P D N V C T F Y Q K G A C S F G S R C R N E H V E A H R D C P Q P
 
AT3G08505.2     - - - - - - L S S D S E S L D R S - - - - - - - - - - - - - - - - - - - - - - I S T T P S R H L Q Q Q G - - - - D N N D
Sb027762_Sorbi1    A T T A A R A S P N S S Q L V A S S R D P R C S G C Q T D M C D Q T Q Q I C K S T T T L S A H Q P A W A V D Y H D N D T
 
AT3G08505.2     G D K S S - - - - - - - - - N V Y C I H P R E Y P I C S F A A A G D C P R G N Q C P H M H G D L C N T C G K K C L H P F
Sb027762_Sorbi1    P D D T T S W P S Y Q A V Q N Q T S Q H P A H L S N C S S A A V G T C P Y G K D C S Q M H G D L C A F C E R Q S L N P N
 
AT3G08505.2     R P E E R E E H T K E C E K K Q K H I E A L K Q S Q D I E C S V C L D R I L S K A T P G E R K F G L L T E C D H P F C I
Sb027762_Sorbi1    Q P D E R G V H V K L C K K N N R Y L E A M R K S E D I E C G V C L D R V L S K P T A A E R R F G L L S D C D H S F C I
 
AT3G08505.2     Q C I R N W R S S A P V S G M D V N S T L R A C P I C R K L S Y F V V P S V V W Y S S P E E K K E I I D I Y K A K L R S
Sb027762_Sorbi1    S C I R N W R S T S P T S G M D V N S T L R A C P I C R K L S Y Y V V P S I T W Y S S K E E K Q E I V E G Y K A K L R S
 
AT3G08505.2     I D C K H F N F G N G N C P F G A S C F Y K H A Y S D G H L E E V V L R H L G S Q E G E T V I T D S I R L S E F L G G L
Sb027762_Sorbi1    I D C K H F D F G K G T C P F G S S C F Y K H A Y D D G R L E D A L L N H H D A E D A S A A I A R L M R L S Y L L T R V
 
AT3G08505.2     Q I F
Sb027762_Sorbi1    H V -
 
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