fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G09600.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp031792 not found in 410aa AT5G52660.1 1st_not 0.462555066 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G09600.2     MSSSPSR-------NPTNAEAPPPPPTSTDAVAEGSSKKVRKPYTITKSRESWTEEEHDK
pp031792_Pp1s16 MNAASSEMLGVMVAGSTLSSIPPIP------VSEEGSKKIRKPYTITKSRESWTEQEHDK
                *.::.*.       ..* :. ** *      *:* .***:***************:****

AT3G09600.2     FLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPY
pp031792_Pp1s16 FLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTGEHVPPPRPKRKSVQPY
                **************** **************************  **********:.:**

AT3G09600.2     PQKASKNAQM---------PLQVSTSFTTTRN-----GDMPGYASWDDASMLLNRVIS--
pp031792_Pp1s16 PQKAPKTAQVQVSDGLRTQAVQTESSYGTGSHKPPMTSTSPSISAWVQHSVSPNPSISYD
                ****.*.**:         .:*..:*: *  :     .  *. ::* : *:  *  **  

AT3G09600.2     -PQHELATLRGAEADIGSKGLLNVSSPSTSGMGSS-----SRTVSGSEIVRKAKQPPVLH
pp031792_Pp1s16 AP--------GIKSEGEGVNLSAVRVPSNSISGSSPGGWPQHVLPASQVAPES----CIR
                 *        * :::  . .*  *  **.*  ***     .:.:..*::. ::     ::

AT3G09600.2     GVPDFAEVYNFIGSVFDPETRGHVEKLKEMDPINFETVLLLMRNLTVNLSNPDLE-----
pp031792_Pp1s16 AAPDFAEVYKFIGSVFDPGVSGHLRKLKEMSAIDRETVLLLMHNLSINLASPDFEEHDAG
                ..*******:******** . **:.*****..*: *******:**::**:.**:*     

AT3G09600.2     -------------------------------------------STSD-------------
pp031792_Pp1s16 EDSPSVSGQAGTLAPSTPILVSPRSGNSAPTQHRASLLQAYADSTADAGTARRHSHDGGR
                                                           **:*             

AT3G09600.2     --------------------------CNDAAEESPLII----------------------
pp031792_Pp1s16 VISASFTSCGVSPAPEVLEPVSLGLPCTALQPQSPVLTTKPESVYSITSLPSLPAGLAGD
                                          *.    :**::                       

AT3G09600.2     --------
pp031792_Pp1s16 ESVDTWWT
BoxShade v3.31 C (beta, 970507) Output
AT3G09600.2     M S S S P S R - - - - - - - N P T N A E A P P P P P T S T D A V A E G S S K K V R K P Y T I T K S R E S W T E E E H D K
pp031792_Pp1s16    M N A A S S E M L G V M V A G S T L S S I P P I P - - - - - - V S E E G S K K I R K P Y T I T K S R E S W T E Q E H D K
 
AT3G09600.2     F L E A L Q L F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T L A H V P P P R P K R K A A H P Y
pp031792_Pp1s16    F L E A L Q L F D R D W K K I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H V P P P R P K R K S V Q P Y
 
AT3G09600.2     P Q K A S K N A Q M - - - - - - - - - P L Q V S T S F T T T R N - - - - - G D M P G Y A S W D D A S M L L N R V I S - -
pp031792_Pp1s16    P Q K A P K T A Q V Q V S D G L R T Q A V Q T E S S Y G T G S H K P P M T S T S P S I S A W V Q H S V S P N P S I S Y D
 
AT3G09600.2     - P Q H E L A T L R G A E A D I G S K G L L N V S S P S T S G M G S S - - - - - S R T V S G S E I V R K A K Q P P V L H
pp031792_Pp1s16    A P - - - - - - - - G I K S E G E G V N L S A V R V P S N S I S G S S P G G W P Q H V L P A S Q V A P E S - - - - C I R
 
AT3G09600.2     G V P D F A E V Y N F I G S V F D P E T R G H V E K L K E M D P I N F E T V L L L M R N L T V N L S N P D L E - - - - -
pp031792_Pp1s16    A A P D F A E V Y K F I G S V F D P G V S G H L R K L K E M S A I D R E T V L L L M H N L S I N L A S P D F E E H D A G
 
AT3G09600.2     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S T S D - - - - - - - - - - - - -
pp031792_Pp1s16    E D S P S V S G Q A G T L A P S T P I L V S P R S G N S A P T Q H R A S L L Q A Y A D S T A D A G T A R R H S H D G G R
 
AT3G09600.2     - - - - - - - - - - - - - - - - - - - - - - - - - - C N D A A E E S P L I I - - - - - - - - - - - - - - - - - - - - - -
pp031792_Pp1s16    V I S A S F T S C G V S P A P E V L E P V S L G L P C T A L Q P Q S P V L T T K P E S V Y S I T S L P S L P A G L A G D
 
AT3G09600.2     - - - - - - - -
pp031792_Pp1s16    E S V D T W W T
 
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