fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G09600.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os009275 not found in 291aa AT5G52660.1 1st_not 0.477973568 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G09600.2     MSSSPSRNPTNAEAPPPPPTSTDAVA----EGSSKKVRKPYTITKSRESWTEEEHDKFLE
Os009275_Os02t0 MVS----------ANQPPPDAAAAAAGSAGEDASKKVRKPYTITKSRESWTEQEHDKFLE
                * *          *  *** :: *.*    *.:*******************:*******

AT3G09600.2     ALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQK
Os009275_Os02t0 ALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQK
                ************* **************************  ******************

AT3G09600.2     ASKNAQMPLQVSTSFTTTRNGDMPGYA-SWDDASMLLNR-----VISPQHE----LATLR
Os009275_Os02t0 ASKNE------------------PGYTIKADSSSMLRNSGMNATVSSWTHNSIPPIVASS
                ****                   ***: . *.:*** *      * *  *:    :.:  

AT3G09600.2     GAEADIGSKGLL--NVSSPSTSGMGSSSRTVSGSEIVRKAKQPPVLHGVPDFAEVYNFIG
Os009275_Os02t0 MVKEDLGAGAMAPNNFCSSSTEG---PARAWQPGETNDQINQVPSLRLMPDFAQVYSFLG
                 .: *:*: .:   *..*.**.*   .:*: . .*   : :* * *: :****:**.*:*

AT3G09600.2     SVFDPETRGHVEKLKEMDPINFETVLLLMRNLTVNLSNPDLE-------STSDCNDAAE-
Os009275_Os02t0 SVFDPSTSGHLQKLKEMNPIDVETALLLMRNLSINLTSPDFEDQKKLLSSYSTPSDGLEL
                *****.* **::*****:**:.**.*******::**:.**:*       * *  .*. * 

AT3G09600.2     -------------ESPLII---
Os009275_Os02t0 GSTRSSVLADRPLSAPFMIKGE
                             .:*::*
BoxShade v3.31 C (beta, 970507) Output
AT3G09600.2     M S S S P S R N P T N A E A P P P P P T S T D A V A - - - - E G S S K K V R K P Y T I T K S R E S W T E E E H D K F L E
Os009275_Os02t0    M V S - - - - - - - - - - A N Q P P P D A A A A A A G S A G E D A S K K V R K P Y T I T K S R E S W T E Q E H D K F L E
 
AT3G09600.2     A L Q L F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T L A H V P P P R P K R K A A H P Y P Q K
Os009275_Os02t0    A L Q L F D R D W K K I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T S E H V P P P R P K R K A A H P Y P Q K
 
AT3G09600.2     A S K N A Q M P L Q V S T S F T T T R N G D M P G Y A - S W D D A S M L L N R - - - - - V I S P Q H E - - - - L A T L R
Os009275_Os02t0    A S K N E - - - - - - - - - - - - - - - - - - P G Y T I K A D S S S M L R N S G M N A T V S S W T H N S I P P I V A S S
 
AT3G09600.2     G A E A D I G S K G L L - - N V S S P S T S G M G S S S R T V S G S E I V R K A K Q P P V L H G V P D F A E V Y N F I G
Os009275_Os02t0    M V K E D L G A G A M A P N N F C S S S T E G - - - P A R A W Q P G E T N D Q I N Q V P S L R L M P D F A Q V Y S F L G
 
AT3G09600.2     S V F D P E T R G H V E K L K E M D P I N F E T V L L L M R N L T V N L S N P D L E - - - - - - - S T S D C N D A A E -
Os009275_Os02t0    S V F D P S T S G H L Q K L K E M N P I D V E T A L L L M R N L S I N L T S P D F E D Q K K L L S S Y S T P S D G L E L
 
AT3G09600.2     - - - - - - - - - - - - - E S P L I I - - -
Os009275_Os02t0    G S T R S S V L A D R P L S A P F M I K G E
 
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