fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G09600.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os009275 not found in 291aa AT5G52660.1 1st_not 0.477973568 II
Os023204 not found in 298aa AT5G52660.2 not_not 0.471365638 III
Os023203 not found in 298aa AT5G52660.2 not_not 0.471365638 III

Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G09600.2     MSSSPSRNPTNAEAPPPPPTSTDAVAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQL
Os023204_Os06t0 MSSAPQQLLDSSSPGPGPGPEVE---DDGGRRVRKPYTITKSRESWTDPEHDKFLEALQL
Os009275_Os02t0 MVSANQPPPDAAAAAAGSAGE------DASKKVRKPYTITKSRESWTEQEHDKFLEALQL
Os023203_Os06t0 MSSAPQQLLDSSSPGPGPGPEVE---DDGGRRVRKPYTITKSRESWTDPEHDKFLEALQL
                * *: .     : . . .  .      ...::***************: ***********

AT3G09600.2     FDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKN
Os023204_Os06t0 FDRDWKKIEAYVGSKTVIQIRSHAQKYFLKVQKNGTGEHLPPPRPKRKAAHPYPHKASKR
Os009275_Os02t0 FDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKASKN
Os023203_Os06t0 FDRDWKKIEAYVGSKTVIQIRSHAQKYFLKVQKNGTGEHLPPPRPKRKAAHPYPHKASKR
                ********* :*************************  *:**************:****.

AT3G09600.2     AQ---MPLQVS-----------TSFTTTRNGDMPG-YASWDDASMLLNRVISPQHELATL
Os023204_Os06t0 APQVVLPQQASHLMEQGCLIPMDISPVARNFNANDVFSSWDSA---LAQSFSP-------
Os009275_Os02t0 EP--------------GYTIKADSSSMLRNSGMNATVSSWTH------NSIPPIVASSM-
Os023203_Os06t0 APQVVLPQQASHLMEQGCLIPMDISPVARNFNANDVFSSWDSA---LAQSFSP-------
                                         .  ** .     :**        . :.*       

AT3G09600.2     RGAEADIGSKGLL--NVSSPSTSGMGSSSRTVSGSEIVRKAKQPPVLHGVPDFAEVYNFI
Os023204_Os06t0 ---RHTHGAA-----NNCSSSVES---QSGTCPTSEAIEQEIMLPTLRAMPDFAQVYNFL
Os009275_Os02t0 --VKEDLGAGAMAPNNFCSSSTEG---PARAWQPGETNDQINQVPSLRLMPDFAQVYSFL
Os023203_Os06t0 ---RHTHGAA-----NNCSSSVES---QSGTCPTSEAIEQEIMLPTLRAMPDFAQVYNFL
                   .   *:      * .*.*...    : :   .*   :    * *: :****:**.*:

AT3G09600.2     GSVFDPETRGHVEKLKEMDPINFETVLLLMRNLTVNLSNP--------------------
Os023204_Os06t0 GSIFDPETSGHLQRLREMDPIDVETVLLLMKNLSINLTNPNFEAHRKVLASHGYGMDQVK
Os009275_Os02t0 GSVFDPSTSGHLQKLKEMNPIDVETALLLMRNLSINLTSPDFEDQKKLLSSYSTPSDGL-
Os023203_Os06t0 GSIFDPETSGHLQRLREMDPIDVETVLLLMKNLSINLTNPNFEAHRKVLASHGYGMDQVK
                **:***.* **:::*:**:**:.**.****:**::**:.*                    

AT3G09600.2     -----DLESTSD--CNDAAEESPLII---
Os023204_Os06t0 HENLGDLGSTHT-------LHLPFMVTTK
Os009275_Os02t0 -----ELGSTRSSVLADRPLSAPFMIKGE
Os023203_Os06t0 HENLGDLGSTHT-------LHLPFMVTTK
                     :* **            *:::   


BoxShade v3.31 C (beta, 970507) Output
AT3G09600.2     M S S S P S R N P T N A E A P P P P P T S T D A V A E G S S K K V R K P Y T I T K S R E S W T E E E H D K F L E A L Q L
Os023204_Os06t0    M S S A P Q Q L L D S S S P G P G P G P E V E - - - D D G G R R V R K P Y T I T K S R E S W T D P E H D K F L E A L Q L
Os009275_Os02t0    M V S A N Q P P P D A A A A A A G S A G E - - - - - - D A S K K V R K P Y T I T K S R E S W T E Q E H D K F L E A L Q L
Os023203_Os06t0    M S S A P Q Q L L D S S S P G P G P G P E V E - - - D D G G R R V R K P Y T I T K S R E S W T D P E H D K F L E A L Q L
 
AT3G09600.2     F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T L A H V P P P R P K R K A A H P Y P Q K A S K N
Os023204_Os06t0    F D R D W K K I E A Y V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P P R P K R K A A H P Y P H K A S K R
Os009275_Os02t0    F D R D W K K I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T S E H V P P P R P K R K A A H P Y P Q K A S K N
Os023203_Os06t0    F D R D W K K I E A Y V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P P R P K R K A A H P Y P H K A S K R
 
AT3G09600.2     A Q - - - M P L Q V S - - - - - - - - - - - T S F T T T R N G D M P G - Y A S W D D A S M L L N R V I S P Q H E L A T L
Os023204_Os06t0    A P Q V V L P Q Q A S H L M E Q G C L I P M D I S P V A R N F N A N D V F S S W D S A - - - L A Q S F S P - - - - - - -
Os009275_Os02t0    E P - - - - - - - - - - - - - - G Y T I K A D S S S M L R N S G M N A T V S S W T H - - - - - - N S I P P I V A S S M -
Os023203_Os06t0    A P Q V V L P Q Q A S H L M E Q G C L I P M D I S P V A R N F N A N D V F S S W D S A - - - L A Q S F S P - - - - - - -
 
AT3G09600.2     R G A E A D I G S K G L L - - N V S S P S T S G M G S S S R T V S G S E I V R K A K Q P P V L H G V P D F A E V Y N F I
Os023204_Os06t0    - - - R H T H G A A - - - - - N N C S S S V E S - - - Q S G T C P T S E A I E Q E I M L P T L R A M P D F A Q V Y N F L
Os009275_Os02t0    - - V K E D L G A G A M A P N N F C S S S T E G - - - P A R A W Q P G E T N D Q I N Q V P S L R L M P D F A Q V Y S F L
Os023203_Os06t0    - - - R H T H G A A - - - - - N N C S S S V E S - - - Q S G T C P T S E A I E Q E I M L P T L R A M P D F A Q V Y N F L
 
AT3G09600.2     G S V F D P E T R G H V E K L K E M D P I N F E T V L L L M R N L T V N L S N P - - - - - - - - - - - - - - - - - - - -
Os023204_Os06t0    G S I F D P E T S G H L Q R L R E M D P I D V E T V L L L M K N L S I N L T N P N F E A H R K V L A S H G Y G M D Q V K
Os009275_Os02t0    G S V F D P S T S G H L Q K L K E M N P I D V E T A L L L M R N L S I N L T S P D F E D Q K K L L S S Y S T P S D G L -
Os023203_Os06t0    G S I F D P E T S G H L Q R L R E M D P I D V E T V L L L M K N L S I N L T N P N F E A H R K V L A S H G Y G M D Q V K
 
AT3G09600.2     - - - - - D L E S T S D - - C N D A A E E S P L I I - - -
Os023204_Os06t0    H E N L G D L G S T H T - - - - - - - L H L P F M V T T K
Os009275_Os02t0    - - - - - E L G S T R S S V L A D R P L S A P F M I K G E
Os023203_Os06t0    H E N L G D L G S T H T - - - - - - - L H L P F M V T T K
 
0