fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G09600.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027895 not found in 294aa AT5G52660.1 1st_not 0.488986784 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G09600.2     MSSSPSRNPTN-----AEAPPPPPTSTDAVAEG--SSKKVRKPYTITKSRESWTEEEHDK
Sb027895_Sorbi1 ---DPS--PLTFLSMVSASAPPPPLQSDAAGSGEDASKKVRKPYTITKSRESWTEQEHDK
                   .**  * .     : :.**** .:**...*  :*******************:****

AT3G09600.2     FLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPY
Sb027895_Sorbi1 FLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPY
                **************** **************************  ***************

AT3G09600.2     PQKASKNAQMPLQVSTSFTTTRNGDMP-GYASWDDASMLLNRVISPQHELATLRGAEADI
Sb027895_Sorbi1 PQKASKNEPNYGLKTDSSSIHRNSGMNVSVSSWAHSSI-------PQAVASTMVKEDLGA
                *******       : * :  **..*  . :** .:*:       **   :*:   : . 

AT3G09600.2     GSKGLLNVSSPSTSGMGSSSRTVSGSEIVRKAKQPPVLHGVPDFAEVYNFIGSVFDPETR
Sb027895_Sorbi1 GTPGPNNFCSSSTEG---PPRTWQPGETNDQINQVPSLRLMPDFAEVYSFLGSVFDPSTS
                *: *  *..*.**.*   ..** . .*   : :* * *: :*******.*:******.* 

AT3G09600.2     GHVEKLKEMDPINFETVLLLMRNLTVNLSNPDLE---------STSD--------CNDAA
Sb027895_Sorbi1 GHLQKLKEMNPIDVETALLLMRNLSINLTSPDFEDQRKLLSSYSTSDGLQLGSSRSSALA
                **::*****:**:.**.*******::**:.**:*         ****        ..  *

AT3G09600.2     EESPLII
Sb027895_Sorbi1 MSTPFM-
                 .:*::
BoxShade v3.31 C (beta, 970507) Output
AT3G09600.2     M S S S P S R N P T N - - - - - A E A P P P P P T S T D A V A E G - - S S K K V R K P Y T I T K S R E S W T E E E H D K
Sb027895_Sorbi1    - - - D P S - - P L T F L S M V S A S A P P P P L Q S D A A G S G E D A S K K V R K P Y T I T K S R E S W T E Q E H D K
 
AT3G09600.2     F L E A L Q L F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T L A H V P P P R P K R K A A H P Y
Sb027895_Sorbi1    F L E A L Q L F D R D W K K I E A F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T S E H V P P P R P K R K A A H P Y
 
AT3G09600.2     P Q K A S K N A Q M P L Q V S T S F T T T R N G D M P - G Y A S W D D A S M L L N R V I S P Q H E L A T L R G A E A D I
Sb027895_Sorbi1    P Q K A S K N E P N Y G L K T D S S S I H R N S G M N V S V S S W A H S S I - - - - - - - P Q A V A S T M V K E D L G A
 
AT3G09600.2     G S K G L L N V S S P S T S G M G S S S R T V S G S E I V R K A K Q P P V L H G V P D F A E V Y N F I G S V F D P E T R
Sb027895_Sorbi1    G T P G P N N F C S S S T E G - - - P P R T W Q P G E T N D Q I N Q V P S L R L M P D F A E V Y S F L G S V F D P S T S
 
AT3G09600.2     G H V E K L K E M D P I N F E T V L L L M R N L T V N L S N P D L E - - - - - - - - - S T S D - - - - - - - - C N D A A
Sb027895_Sorbi1    G H L Q K L K E M N P I D V E T A L L L M R N L S I N L T S P D F E D Q R K L L S S Y S T S D G L Q L G S S R S S A L A
 
AT3G09600.2     E E S P L I I
Sb027895_Sorbi1    M S T P F M -
 
0