fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G09600.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb033225 SNAPNHLRLGLLDMLV in 376/488 AT5G52660.2 not_not 0.449339207 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G09600.2     --------------------MSSSPSRNPTNAEAPP------------------------
Sb033225_Sorbi1 GLRYATRKEEQEGSGRSMVSMSTTP--HPLDPSVPAVAGGGKEEEEEAGRAREEAAAAAA
                                    **::*  :* :...*.                        

AT3G09600.2     -----PPPTSTDAVAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDF
Sb033225_Sorbi1 APAAVPVPTVGNDDDDDGPRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEAY
                     * **  :   :...::***************: ******************** :

AT3G09600.2     VGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQ---MPLQVS
Sb033225_Sorbi1 VGSKTVIQIRSHAQKYFLKVQKNGTGEHLPPPRPKRKAAHPYPHKASKKALQVVLPQQAS
                *************************  *:**************:****:*    :* *.*

AT3G09600.2     TSF---------TTTRNGDMPGYASWDDASMLLNRVISPQHELATLRGAEADIGSKGLLN
Sb033225_Sorbi1 HIMEQGCGTPMDTATVATD----SSANDAFPVQH--FSPRHT----QGATYN--------
                  :         *:*   *    :* :**  : :  :**:*     :**  :        

AT3G09600.2     VSSPSTSGMGSSSRTVSGSEIVRKAKQPPVLHGVPDFAEVYNFIGSVFDPETRGHVEKLK
Sb033225_Sorbi1 ----NSSSIGSQSGTWPTSEGTEQDIRHPALSAMPDFARVYNFLGSIFDPETNGHLQQLK
                    .:*.:**.* * . ** ..:  : *.* .:****.****:**:*****.**:::**

AT3G09600.2     EMDPINFETVLLLMRNLTVNLSNPDLES-----TSDCNDAAEES-------PLII---
Sb033225_Sorbi1 EMDPIDAETVLLLMKNLSINLTSPNFEEHRRLLSSHASSMDQEMGSSHIHLPFMITSK
                *****: *******:**::**:.*::*.     :*....  :*        *::*
BoxShade v3.31 C (beta, 970507) Output
AT3G09600.2     - - - - - - - - - - - - - - - - - - - - M S S S P S R N P T N A E A P P - - - - - - - - - - - - - - - - - - - - - - - -
Sb033225_Sorbi1    G L R Y A T R K E E Q E G S G R S M V S M S T T P - - H P L D P S V P A V A G G G K E E E E E A G R A R E E A A A A A A
 
AT3G09600.2     - - - - - P P P T S T D A V A E G S S K K V R K P Y T I T K S R E S W T E E E H D K F L E A L Q L F D R D W K K I E D F
Sb033225_Sorbi1    A P A A V P V P T V G N D D D D D G P R R V R K P Y T I T K S R E S W T D P E H D K F L E A L Q L F D R D W K K I E A Y
 
AT3G09600.2     V G S K T V I Q I R S H A Q K Y F L K V Q K N G T L A H V P P P R P K R K A A H P Y P Q K A S K N A Q - - - M P L Q V S
Sb033225_Sorbi1    V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P P R P K R K A A H P Y P H K A S K K A L Q V V L P Q Q A S
 
AT3G09600.2     T S F - - - - - - - - - T T T R N G D M P G Y A S W D D A S M L L N R V I S P Q H E L A T L R G A E A D I G S K G L L N
Sb033225_Sorbi1    H I M E Q G C G T P M D T A T V A T D - - - - S S A N D A F P V Q H - - F S P R H T - - - - Q G A T Y N - - - - - - - -
 
AT3G09600.2     V S S P S T S G M G S S S R T V S G S E I V R K A K Q P P V L H G V P D F A E V Y N F I G S V F D P E T R G H V E K L K
Sb033225_Sorbi1    - - - - N S S S I G S Q S G T W P T S E G T E Q D I R H P A L S A M P D F A R V Y N F L G S I F D P E T N G H L Q Q L K
 
AT3G09600.2     E M D P I N F E T V L L L M R N L T V N L S N P D L E S - - - - - T S D C N D A A E E S - - - - - - - P L I I - - -
Sb033225_Sorbi1    E M D P I D A E T V L L L M K N L S I N L T S P N F E E H R R L L S S H A S S M D Q E M G S S H I H L P F M I T S K
 
0