fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G09600.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027895 not found in 294aa AT5G52660.1 1st_not 0.488986784 II
Sb033225 SNAPNHLRLGLLDMLV in 376/488 AT5G52660.2 not_not 0.449339207 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G09600.2     --------------------MSSSPSRNPTN--------------------------AEA
Sb027895_Sorbi1 -----------------------DPS--PLTFLSM---------------------VSAS
Sb033225_Sorbi1 GLRYATRKEEQEGSGRSMVSMSTTPH--PLD-PSVPAVAGGGKEEEEEAGRAREEAAAAA
                                        *   *                            : :

AT3G09600.2     PPPPPTSTDAVAEG----SSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIED
Sb027895_Sorbi1 APPPPLQSDAAGSGE--DASKKVRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEA
Sb033225_Sorbi1 AAPAAVPVPTVGNDDDDDGPRRVRKPYTITKSRESWTDPEHDKFLEALQLFDRDWKKIEA
                ..*..    :....    ..::***************: ******************** 

AT3G09600.2     FVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKNAQMPLQVSTS
Sb027895_Sorbi1 FVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKASKNEPNYGLKTDS
Sb033225_Sorbi1 YVGSKTVIQIRSHAQKYFLKVQKNGTGEHLPPPRPKRKAAHPYPHKASKKALQVVLPQQA
                :*************************  *:**************:****:         :

AT3G09600.2     FTTTRNG-DMP-GYASWDDASMLLNRV-----ISPQHELATLRGAEADIGSKGLLNVSSP
Sb027895_Sorbi1 SSIHRNS-GMNVSVSSWAHSSI------------PQAVASTMVKEDLGAGTPGPNNFCSS
Sb033225_Sorbi1 SHIMEQGCGTPMDTATVATDSS-ANDAFPVQHFSPRHTQGATYNNSSSIG----------
                    .:. .   . ::    *             *:   .:    . . *          

AT3G09600.2     STSGMGSSSRTVSGSEIVRKAKQPPVLHGVPDFAEVYNFIGSVFDPETRGHVEKLKEMDP
Sb027895_Sorbi1 STEG---PPRTWQPGETNDQINQVPSLRLMPDFAEVYSFLGSVFDPSTSGHLQKLKEMNP
Sb033225_Sorbi1 SQSG------TWPTSEGTEQDIRHPALSAMPDFARVYNFLGSIFDPETNGHLQQLKEMDP
                * .*      *   .*   :  : * *  :****.**.*:**:***.* **:::****:*

AT3G09600.2     INFETVLLLMRNLTVNLSNPDLE---------STSD--------CNDAAEESPLII---
Sb027895_Sorbi1 IDVETALLLMRNLSINLTSPDFEDQRKLLSSYSTSDGLQLGSSRSSALAMSTPFM----
Sb033225_Sorbi1 IDAETVLLLMKNLSINLTSPNFEEHRRLLSSHASSMDQEMGSS-----HIHLPFMITSK
                *: **.****:**::**:.*::*         ::*                 *::
BoxShade v3.31 C (beta, 970507) Output
AT3G09600.2     - - - - - - - - - - - - - - - - - - - - M S S S P S R N P T N - - - - - - - - - - - - - - - - - - - - - - - - - - A E A
Sb027895_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - D P S - - P L T F L S M - - - - - - - - - - - - - - - - - - - - - V S A S
Sb033225_Sorbi1    G L R Y A T R K E E Q E G S G R S M V S M S T T P H - - P L D - P S V P A V A G G G K E E E E E A G R A R E E A A A A A
 
AT3G09600.2     P P P P P T S T D A V A E G - - - - S S K K V R K P Y T I T K S R E S W T E E E H D K F L E A L Q L F D R D W K K I E D
Sb027895_Sorbi1    A P P P P L Q S D A A G S G E - - D A S K K V R K P Y T I T K S R E S W T E Q E H D K F L E A L Q L F D R D W K K I E A
Sb033225_Sorbi1    A A P A A V P V P T V G N D D D D D G P R R V R K P Y T I T K S R E S W T D P E H D K F L E A L Q L F D R D W K K I E A
 
AT3G09600.2     F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T L A H V P P P R P K R K A A H P Y P Q K A S K N A Q M P L Q V S T S
Sb027895_Sorbi1    F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T S E H V P P P R P K R K A A H P Y P Q K A S K N E P N Y G L K T D S
Sb033225_Sorbi1    Y V G S K T V I Q I R S H A Q K Y F L K V Q K N G T G E H L P P P R P K R K A A H P Y P H K A S K K A L Q V V L P Q Q A
 
AT3G09600.2     F T T T R N G - D M P - G Y A S W D D A S M L L N R V - - - - - I S P Q H E L A T L R G A E A D I G S K G L L N V S S P
Sb027895_Sorbi1    S S I H R N S - G M N V S V S S W A H S S I - - - - - - - - - - - - P Q A V A S T M V K E D L G A G T P G P N N F C S S
Sb033225_Sorbi1    S H I M E Q G C G T P M D T A T V A T D S S - A N D A F P V Q H F S P R H T Q G A T Y N N S S S I G - - - - - - - - - -
 
AT3G09600.2     S T S G M G S S S R T V S G S E I V R K A K Q P P V L H G V P D F A E V Y N F I G S V F D P E T R G H V E K L K E M D P
Sb027895_Sorbi1    S T E G - - - P P R T W Q P G E T N D Q I N Q V P S L R L M P D F A E V Y S F L G S V F D P S T S G H L Q K L K E M N P
Sb033225_Sorbi1    S Q S G - - - - - - T W P T S E G T E Q D I R H P A L S A M P D F A R V Y N F L G S I F D P E T N G H L Q Q L K E M D P
 
AT3G09600.2     I N F E T V L L L M R N L T V N L S N P D L E - - - - - - - - - S T S D - - - - - - - - C N D A A E E S P L I I - - -
Sb027895_Sorbi1    I D V E T A L L L M R N L S I N L T S P D F E D Q R K L L S S Y S T S D G L Q L G S S R S S A L A M S T P F M - - - -
Sb033225_Sorbi1    I D A E T V L L L M K N L S I N L T S P N F E E H R R L L S S H A S S M D Q E M G S S - - - - - H I H L P F M I T S K
 
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