fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G09600.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026827 not found in 293aa AT3G09600.1 1st_not 0.682819383 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G09600.2     MSSSPSRNPTNAEAPPPPPTSTDAVAEGSSKKVRKPYTITKSRESWTEEEHDKFLEALQL
gm026827_Glyma1 MNSTTNTSNSQSMAAAAP-------SDGSGKKVRKPYTITKSRESWTEEEHDKFLEALQL
                *.*:.. . ::: *...*       ::**.******************************

AT3G09600.2     FDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTLAHVPPPRPKRKAAHPYPQKASKN
gm026827_Glyma1 FDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTVAHVPPPRPKRKAAHPYPQKASKN
                ************************************:***********************

AT3G09600.2     AQMPLQVSTSFTTTRNGDMPGYASWDDASMLLN----RVISPQHELATL-RGAEADIGSK
gm026827_Glyma1 VLVPLPASIGYASSRNTLAPGFASWDETSLLMNAGADKPMTCQDELNNLHHGNEADIGSK
                . :** .* .::::**   **:****::*:*:*    : :: *.** .* :* *******

AT3G09600.2     GLLNVSSPSTSGMGSSSRTVSGSEIVRKAKQPPVLHGVPDFAEVYNFIGSVFDPETRGHV
gm026827_Glyma1 GIAQITNSSLSGVGNSTGALPTSEIPKQGKQAPVLHGLPDFAEVYSFIGSVFDPETNDHV
                *: :::..* **:*.*: ::. *** ::.**.*****:*******.**********..**

AT3G09600.2     EKLKEMDPINFETVLLLMRNLTVNLSNPDLE-----STSDCNDAA-----EESPLII---
gm026827_Glyma1 QKLKEMDPINFETVLLLMRNLTVNLSSPDFEPIKVLSTYDVNTVAVGIDVKTNDLSCQTA
                :*************************.**:*     ** * * .*     : . *
BoxShade v3.31 C (beta, 970507) Output
AT3G09600.2     M S S S P S R N P T N A E A P P P P P T S T D A V A E G S S K K V R K P Y T I T K S R E S W T E E E H D K F L E A L Q L
gm026827_Glyma1    M N S T T N T S N S Q S M A A A A P - - - - - - - S D G S G K K V R K P Y T I T K S R E S W T E E E H D K F L E A L Q L
 
AT3G09600.2     F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T L A H V P P P R P K R K A A H P Y P Q K A S K N
gm026827_Glyma1    F D R D W K K I E D F V G S K T V I Q I R S H A Q K Y F L K V Q K N G T V A H V P P P R P K R K A A H P Y P Q K A S K N
 
AT3G09600.2     A Q M P L Q V S T S F T T T R N G D M P G Y A S W D D A S M L L N - - - - R V I S P Q H E L A T L - R G A E A D I G S K
gm026827_Glyma1    V L V P L P A S I G Y A S S R N T L A P G F A S W D E T S L L M N A G A D K P M T C Q D E L N N L H H G N E A D I G S K
 
AT3G09600.2     G L L N V S S P S T S G M G S S S R T V S G S E I V R K A K Q P P V L H G V P D F A E V Y N F I G S V F D P E T R G H V
gm026827_Glyma1    G I A Q I T N S S L S G V G N S T G A L P T S E I P K Q G K Q A P V L H G L P D F A E V Y S F I G S V F D P E T N D H V
 
AT3G09600.2     E K L K E M D P I N F E T V L L L M R N L T V N L S N P D L E - - - - - S T S D C N D A A - - - - - E E S P L I I - - -
gm026827_Glyma1    Q K L K E M D P I N F E T V L L L M R N L T V N L S S P D F E P I K V L S T Y D V N T V A V G I D V K T N D L S C Q T A
 
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