fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G10760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051924 not found in 312aa AT3G10760.1 not_1st 0.479125248 II
Pt005816 not found in 318aa AT3G10760.1 not_1st 0.556660039 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G10760.1     MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRTPNHGNGNSNQPHHH---H
gm051924_Glyma1 MREDDSNWFSRWEEELPSPEELMPLSQTLITPDLAMAFDIRNPHTSNTAQNQHHHH---H
pt005816_POPTR_ MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDITNPSNTTTTTTTNNHNSSLH
                ******:**:******** *****:**:**:****:**** .*   .   .  :*:   *

AT3G10760.1     HHQ--TTPPTPSQLQLPSS------------------QANSSAEFAADSADLGSGGAAGD
gm051924_Glyma1 QNQ------QPPQLQQPSNPSSLPNPQQQQQQQQQQQQQPTSAEF-ADSGELGS-GTAGE
pt005816_POPTR_ QNQPLPPPPPPPAAVSPTPTNPLASP------------QPNSGDFAADSSELGS-GAAGD
                ::*       *.    *:                      .*.:* ***.:*** *:**:

AT3G10760.1     EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR
gm051924_Glyma1 EPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYR
pt005816_POPTR_ EP-RTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYR
                ** ***************************************.*****************

AT3G10760.1     LYLKRMQGLSSGGGAGS-----------DPATDRLFASSPVPAHFLHPNRVPSSDHFMPS
gm051924_Glyma1 LYLKRMQGISAAGPGGASGAVA------DPATDHLFASSPVPAHFLHPAARPNSDHFLP-
pt005816_POPTR_ LYLKRMQGLSSGGGGNGTGGGGGLTGGTDAATDHLFASSPVPAHFLHP-GRPNSDHFLP-
                ********:*:.* ...           *.***:**************   *.****:* 

AT3G10760.1     FVPIATL---QQQQQMAAAAAAAAAANPHLQ-PPQFHRQIAAAHFGSPTNGGFSSPTSNG
gm051924_Glyma1 FVP--ALHHHQQQQQMAA--------------AAQYHRQV--GHFGSPPNGHFENP----
pt005816_POPTR_ FVPVAALQNHHHQHQMAAMG--------HPQLPSQYHRQM--GHFGSPTNGQFEHP----
                ***  :*   ::*:****              ..*:***:  .*****.** *. *    

AT3G10760.1     QFGSPTSNGFGSPTTNGKFDPSFLAVRQTQQQPIQRMSTPSLHS--PVSNYVEDLESAN-
gm051924_Glyma1 ----------------------FMS-RPN-LQRMGGGGGPVHNNHHPVSGYVEDMESANA
pt005816_POPTR_ ----------------------FLP-RQT-QQPVHRMGAPVPNT---VPGYVEDLESVN-
                                      *:. * .  * :   . *  :.   *..****:**.* 

AT3G10760.1     ANGGRTVLTLFPTRDD
gm051924_Glyma1 ASGGRKVLTLFPTGDD
pt005816_POPTR_ GNGGRKVLTLFPTGDD
                ..***.******* **
BoxShade v3.31 C (beta, 970507) Output
AT3G10760.1     M R E D D S D W F A R W E E E L P S P E E L M P I S Q S L I S P D L A L A F D I R T P N H G N G N S N Q P H H H - - - H
gm051924_Glyma1    M R E D D S N W F S R W E E E L P S P E E L M P L S Q T L I T P D L A M A F D I R N P H T S N T A Q N Q H H H H - - - H
pt005816_POPTR_    M R E D D S N W F S R W E E E L P S L E E L M P L S Q T L I T P D L A L A F D I T N P S N T T T T T T T N N H N S S L H
 
AT3G10760.1     H H Q - - T T P P T P S Q L Q L P S S - - - - - - - - - - - - - - - - - - Q A N S S A E F A A D S A D L G S G G A A G D
gm051924_Glyma1    Q N Q - - - - - - Q P P Q L Q Q P S N P S S L P N P Q Q Q Q Q Q Q Q Q Q Q Q Q P T S A E F - A D S G E L G S - G T A G E
pt005816_POPTR_    Q N Q P L P P P P P P P A A V S P T P T N P L A S P - - - - - - - - - - - - Q P N S G D F A A D S S E L G S - G A A G D
 
AT3G10760.1     E P A R T L K R P R L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R
gm051924_Glyma1    E P A R T L K R P R L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R
pt005816_POPTR_    E P - R T L K R P R L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M N V D G L T R E N V A S H L Q K Y R
 
AT3G10760.1     L Y L K R M Q G L S S G G G A G S - - - - - - - - - - - D P A T D R L F A S S P V P A H F L H P N R V P S S D H F M P S
gm051924_Glyma1    L Y L K R M Q G I S A A G P G G A S G A V A - - - - - - D P A T D H L F A S S P V P A H F L H P A A R P N S D H F L P -
pt005816_POPTR_    L Y L K R M Q G L S S G G G G N G T G G G G G L T G G T D A A T D H L F A S S P V P A H F L H P - G R P N S D H F L P -
 
AT3G10760.1     F V P I A T L - - - Q Q Q Q Q M A A A A A A A A A A N P H L Q - P P Q F H R Q I A A A H F G S P T N G G F S S P T S N G
gm051924_Glyma1    F V P - - A L H H H Q Q Q Q Q M A A - - - - - - - - - - - - - - A A Q Y H R Q V - - G H F G S P P N G H F E N P - - - -
pt005816_POPTR_    F V P V A A L Q N H H H Q H Q M A A M G - - - - - - - - H P Q L P S Q Y H R Q M - - G H F G S P T N G Q F E H P - - - -
 
AT3G10760.1     Q F G S P T S N G F G S P T T N G K F D P S F L A V R Q T Q Q Q P I Q R M S T P S L H S - - P V S N Y V E D L E S A N -
gm051924_Glyma1    - - - - - - - - - - - - - - - - - - - - - - F M S - R P N - L Q R M G G G G G P V H N N H H P V S G Y V E D M E S A N A
pt005816_POPTR_    - - - - - - - - - - - - - - - - - - - - - - F L P - R Q T - Q Q P V H R M G A P V P N T - - - V P G Y V E D L E S V N -
 
AT3G10760.1     A N G G R T V L T L F P T R D D
gm051924_Glyma1    A S G G R K V L T L F P T G D D
pt005816_POPTR_    G N G G R K V L T L F P T G D D
 
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