fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G10760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005816 not found in 318aa AT3G10760.1 not_1st 0.556660039 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G10760.1     MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRTPNHGNGNSNQPHHH---H
pt005816_POPTR_ MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDITNPSNTTTTTTTNNHNSSLH
                ******:**:******** *****:**:**:********* .*.: . .:.  :*:   *

AT3G10760.1     HHQTTP----------PTPSQLQLPSSQANSSAEFAADSADLGSGGAAGDEPARTLKRPR
pt005816_POPTR_ QNQPLPPPPPPPAAVSPTPTN-PLASPQPN-SGDFAADSSELGS-GAAGDEP-RTLKRPR
                ::*. *          ***::  *.*.*.* *.:*****::*** ******* *******

AT3G10760.1     LVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS
pt005816_POPTR_ LVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYRLYLKRMQGLS
                ********************************.***************************

AT3G10760.1     SGGG-----------AGSDPATDRLFASSPVPAHFLHPNRVPSSDHFMPSFVPIATLQ--
pt005816_POPTR_ SGGGGNGTGGGGGLTGGTDAATDHLFASSPVPAHFLHPGR-PNSDHFLP-FVPVAALQNH
                ****           .*:*.***:**************.* *.****:* ***:*:**  

AT3G10760.1     -QQQQMAAAAAAAAAANPHLQPPQFHRQIAAAHFGSPTNGGFSSPTSNGQFGSPTSNGFG
pt005816_POPTR_ HHQHQM------AAMGHPQL-PSQYHRQM--GHFGSPTNGQFEHP---------------
                 :*:**      ** .:*:* *.*:***:  .******** *. *               

AT3G10760.1     SPTTNGKFDPSFLAVRQTQQQPIQRMSTPSLHSPVSNYVEDLESANANGGRTVLTLFPTR
pt005816_POPTR_ -------FLP-----RQT-QQPVHRMGAP-VPNTVPGYVEDLESVNGNGGRKVLTLFPTG
                       * *     *** ***::**.:* : ..*..*******.*.****.******* 

AT3G10760.1     DD
pt005816_POPTR_ DD
                **
BoxShade v3.31 C (beta, 970507) Output
AT3G10760.1     M R E D D S D W F A R W E E E L P S P E E L M P I S Q S L I S P D L A L A F D I R T P N H G N G N S N Q P H H H - - - H
pt005816_POPTR_    M R E D D S N W F S R W E E E L P S L E E L M P L S Q T L I T P D L A L A F D I T N P S N T T T T T T T N N H N S S L H
 
AT3G10760.1     H H Q T T P - - - - - - - - - - P T P S Q L Q L P S S Q A N S S A E F A A D S A D L G S G G A A G D E P A R T L K R P R
pt005816_POPTR_    Q N Q P L P P P P P P P A A V S P T P T N - P L A S P Q P N - S G D F A A D S S E L G S - G A A G D E P - R T L K R P R
 
AT3G10760.1     L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R L Y L K R M Q G L S
pt005816_POPTR_    L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M N V D G L T R E N V A S H L Q K Y R L Y L K R M Q G L S
 
AT3G10760.1     S G G G - - - - - - - - - - - A G S D P A T D R L F A S S P V P A H F L H P N R V P S S D H F M P S F V P I A T L Q - -
pt005816_POPTR_    S G G G G N G T G G G G G L T G G T D A A T D H L F A S S P V P A H F L H P G R - P N S D H F L P - F V P V A A L Q N H
 
AT3G10760.1     - Q Q Q Q M A A A A A A A A A A N P H L Q P P Q F H R Q I A A A H F G S P T N G G F S S P T S N G Q F G S P T S N G F G
pt005816_POPTR_    H H Q H Q M - - - - - - A A M G H P Q L - P S Q Y H R Q M - - G H F G S P T N G Q F E H P - - - - - - - - - - - - - - -
 
AT3G10760.1     S P T T N G K F D P S F L A V R Q T Q Q Q P I Q R M S T P S L H S P V S N Y V E D L E S A N A N G G R T V L T L F P T R
pt005816_POPTR_    - - - - - - - F L P - - - - - R Q T - Q Q P V H R M G A P - V P N T V P G Y V E D L E S V N G N G G R K V L T L F P T G
 
AT3G10760.1     D D
pt005816_POPTR_    D D
 
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