fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039130 not found in 306aa AT2G38090.1 1st_not 0.493482309 II
Pt041952 not found in 292aa AT5G05790.1 1st_not 0.478584729 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G11280.1     --METLHPFSHLPISDHRFVVQEMVSLHSSSSGSWTKEENKMFERALAIYAEDSPDRWFK
pt041952_POPTR_ --METLYSSWSMSNP-----------ICVAQTTEWTKEENKMFERALAIFDEHEPDRWLK
gm039130_Glyma1 MELETIYPPCFMPNSNW--------FVQESHSTEWTREDNKKFESALAIYDNDTPDRWFK
                  :**::.   :. .           :  : : .**:*:** ** ****: :. ****:*

AT3G11280.1     VASMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPIPGYPAASSPLGF----DTDMCRKRPS
pt041952_POPTR_ VAAMIPGKTVNDVIKQYKKLEEDVCDIEAGRVPVPGYLSSSFTSELVDNSTFDAYRKRPL
gm039130_Glyma1 VAAMIPGKTVFDVIKQYRELEEDVSEIEAGRVPIPGYLASSFTFELVDNHNYDGCRRRLA
                **:******* **:*** :***** :*******:*** ::* .  :      *  *:*  

AT3G11280.1     GARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQ
pt041952_POPTR_ NIKSADQQRKKGVPWTEEEHRRFLMGLLKHGKGDWRNISRNFVGSKTPTQVASHAQKYFI
gm039130_Glyma1 PVRGSDQERKKGVPWTEDEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYI
                  :.:**:*********:******:****:************* :*************: 

AT3G11280.1     RQ-LSGAKDKRRPSIHDITTGNLL------NANLNRSFSDHRDILPDLG-------FIDK
pt041952_POPTR_ RQQLSGVKDKRRPSIHDITTLNLAGSTSPSDGDKASSLDQSDVLLPQQKPAGMQKLLIDW
gm039130_Glyma1 RQKVSGGKDKRRPSIHDITTVNLT-ETSASDKNKPQLFNASPVLAPQQKLNSISKVQLGW
                ** :** ************* **       : :    :.    : *:          :. 

AT3G11280.1     DDT--EEGVIFMGQNLSSENLFSPSPTSFEA-AINFAGENVFSAGA--------------
pt041952_POPTR_ DES--KDGS-VMTFGSTHGDLFESSPYEISSNGLTFQGQNLYAGARHGARIKPRNLVFQL
gm039130_Glyma1 TSSHYNDGS-FMVFNPNSDALFVSSSPDVTSMALKMQGQDLYDCALHEAYAKVKVPGFSM
                 .:  ::*  .*  . .   ** .*. .. : .:.: *::::  .               

AT3G11280.1     ----------------
pt041952_POPTR_ SPPRFQ------IH--
gm039130_Glyma1 APRDFNNEAVFGIHAL
BoxShade v3.31 C (beta, 970507) Output
AT3G11280.1     - - M E T L H P F S H L P I S D H R F V V Q E M V S L H S S S S G S W T K E E N K M F E R A L A I Y A E D S P D R W F K
pt041952_POPTR_    - - M E T L Y S S W S M S N P - - - - - - - - - - - I C V A Q T T E W T K E E N K M F E R A L A I F D E H E P D R W L K
gm039130_Glyma1    M E L E T I Y P P C F M P N S N W - - - - - - - - F V Q E S H S T E W T R E D N K K F E S A L A I Y D N D T P D R W F K
 
AT3G11280.1     V A S M I P G K T V F D V M K Q Y S K L E E D V F D I E A G R V P I P G Y P A A S S P L G F - - - - D T D M C R K R P S
pt041952_POPTR_    V A A M I P G K T V N D V I K Q Y K K L E E D V C D I E A G R V P V P G Y L S S S F T S E L V D N S T F D A Y R K R P L
gm039130_Glyma1    V A A M I P G K T V F D V I K Q Y R E L E E D V S E I E A G R V P I P G Y L A S S F T F E L V D N H N Y D G C R R R L A
 
AT3G11280.1     G A R G S D Q D R K K G V P W T E E E H R R F L L G L L K Y G K G D W R N I S R N F V V S K T P T Q V A S H A Q K Y Y Q
pt041952_POPTR_    N I K S A D Q Q R K K G V P W T E E E H R R F L M G L L K H G K G D W R N I S R N F V G S K T P T Q V A S H A Q K Y F I
gm039130_Glyma1    P V R G S D Q E R K K G V P W T E D E H R R F L M G L L K Y G K G D W R N I S R N F V V T K T P T Q V A S H A Q K Y Y I
 
AT3G11280.1     R Q - L S G A K D K R R P S I H D I T T G N L L - - - - - - N A N L N R S F S D H R D I L P D L G - - - - - - - F I D K
pt041952_POPTR_    R Q Q L S G V K D K R R P S I H D I T T L N L A G S T S P S D G D K A S S L D Q S D V L L P Q Q K P A G M Q K L L I D W
gm039130_Glyma1    R Q K V S G G K D K R R P S I H D I T T V N L T - E T S A S D K N K P Q L F N A S P V L A P Q Q K L N S I S K V Q L G W
 
AT3G11280.1     D D T - - E E G V I F M G Q N L S S E N L F S P S P T S F E A - A I N F A G E N V F S A G A - - - - - - - - - - - - - -
pt041952_POPTR_    D E S - - K D G S - V M T F G S T H G D L F E S S P Y E I S S N G L T F Q G Q N L Y A G A R H G A R I K P R N L V F Q L
gm039130_Glyma1    T S S H Y N D G S - F M V F N P N S D A L F V S S S P D V T S M A L K M Q G Q D L Y D C A L H E A Y A K V K V P G F S M
 
AT3G11280.1     - - - - - - - - - - - - - - - -
pt041952_POPTR_    S P P R F Q - - - - - - I H - -
gm039130_Glyma1    A P R D F N N E A V F G I H A L
 
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