fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11280.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039130 not found in 306aa AT2G38090.1 1st_not 0.493482309 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G11280.1     --METLHPFSHLPISDHRFVVQEMVSLHSSSSGSWTKEENKMFERALAIYAEDSPDRWFK
gm039130_Glyma1 MELETIYPPCFMPNSN--WFVQE------SHSTEWTREDNKKFESALAIYDNDTPDRWFK
                  :**::* ..:* *:  :.***      * * .**:*:** ** ***** :*:******

AT3G11280.1     VASMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPIPGYPAASSPL----GFDTDMCRKRPS
gm039130_Glyma1 VAAMIPGKTVFDVIKQYRELEEDVSEIEAGRVPIPGYLASSFTFELVDNHNYDGCRRRLA
                **:**********:*** :***** :*********** *:* .:    ..: * **:* :

AT3G11280.1     GARGSDQDRKKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVVSKTPTQVASHAQKYYQ
gm039130_Glyma1 PVRGSDQERKKGVPWTEDEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYYI
                 .*****:*********:******:*******************:************** 

AT3G11280.1     RQ-LSGAKDKRRPSIHDITTGNLL-----NANLNRSFSDHRDILP----------DLGFI
gm039130_Glyma1 RQKVSGGKDKRRPSIHDITTVNLTETSASDKNKPQLFNASPVLAPQQKLNSISKVQLGWT
                ** :**.************* **      : *  : *.    : *          :**: 

AT3G11280.1     DKDDTEEGVIFMGQNLSSENLF---SPSPTS----------FEAAI--------------
gm039130_Glyma1 SSHYNDGS--FMVFNPNSDALFVSSSPDVTSMALKMQGQDLYDCALHEAYAKVKVPGFSM
                ... .: .  **  * .*: **   **. **          ::.*:              

AT3G11280.1     ---NFAGENVFSAGA-
gm039130_Glyma1 APRDFNNEAVFGIHAL
                   :* .* **.  *
BoxShade v3.31 C (beta, 970507) Output
AT3G11280.1     - - M E T L H P F S H L P I S D H R F V V Q E M V S L H S S S S G S W T K E E N K M F E R A L A I Y A E D S P D R W F K
gm039130_Glyma1    M E L E T I Y P P C F M P N S N - - W F V Q E - - - - - - S H S T E W T R E D N K K F E S A L A I Y D N D T P D R W F K
 
AT3G11280.1     V A S M I P G K T V F D V M K Q Y S K L E E D V F D I E A G R V P I P G Y P A A S S P L - - - - G F D T D M C R K R P S
gm039130_Glyma1    V A A M I P G K T V F D V I K Q Y R E L E E D V S E I E A G R V P I P G Y L A S S F T F E L V D N H N Y D G C R R R L A
 
AT3G11280.1     G A R G S D Q D R K K G V P W T E E E H R R F L L G L L K Y G K G D W R N I S R N F V V S K T P T Q V A S H A Q K Y Y Q
gm039130_Glyma1    P V R G S D Q E R K K G V P W T E D E H R R F L M G L L K Y G K G D W R N I S R N F V V T K T P T Q V A S H A Q K Y Y I
 
AT3G11280.1     R Q - L S G A K D K R R P S I H D I T T G N L L - - - - - N A N L N R S F S D H R D I L P - - - - - - - - - - D L G F I
gm039130_Glyma1    R Q K V S G G K D K R R P S I H D I T T V N L T E T S A S D K N K P Q L F N A S P V L A P Q Q K L N S I S K V Q L G W T
 
AT3G11280.1     D K D D T E E G V I F M G Q N L S S E N L F - - - S P S P T S - - - - - - - - - - F E A A I - - - - - - - - - - - - - -
gm039130_Glyma1    S S H Y N D G S - - F M V F N P N S D A L F V S S S P D V T S M A L K M Q G Q D L Y D C A L H E A Y A K V K V P G F S M
 
AT3G11280.1     - - - N F A G E N V F S A G A -
gm039130_Glyma1    A P R D F N N E A V F G I H A L
 
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