fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11580.1 SSRTVRLFGVNLECH at 213/267 in AT3G11580.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004534 SSRVLRLFGVNMECQ in 275/344 AT2G36080.1 1st_not 0.412244897 II
Pt007926 NSKRLRLFGVNLECQ in 298/363 AT2G36080.1 1st_not 0.438775510 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G11580.1     MSVNHY----HNTLSL--------------------------------------HH----
gm004534_Glyma0 MSTNHYTMDLPEPTLWWPHPHQQQLTLIDPDP----------------------------
pt007926_POPTR_ MSINHFSTDLQETLSWWAQQHQQQQPIMEPNPNASSSTPNEPPNISNPNSSWPPHHSWLN
                ** **:     :.                                               

AT3G11580.1     ---------------------------------HHQ---------NDVAIAQRESLFEKS
gm004534_Glyma0 ------------LPLN--LNNDDNDNGDDNDNDENQTVTTTTTGGEEEIINNKEPMFEKP
pt007926_POPTR_ PYNTAQQPSSMFLPQNPTLNFNLNEE-DDEDQDHEQQQQDETQQEQEVLVLDKEPMFEKP
                                                 ..*         ::  : ::*.:***.

AT3G11580.1     LTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGKCWKFR
gm004534_Glyma0 LTPSDVGKLNRLVIPKQHAEKYFPLS-------GGDSGSSECKGLLLSFEDESGKCWRFR
pt007926_POPTR_ LTPSDVGKLNRLVIPKQHAEKYFPL--------SGDSV---DKGLLLSFEDESGRYWKFR
                *************************        .**.     **:*********: *:**

AT3G11580.1     YSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRRRGEASSSPA--
gm004534_Glyma0 YSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRADAQRLFIGWRRRRQSDALPPPA
pt007926_POPTR_ YSYWNSSQSYVLTKGWSRYVKEKQLDAGDVVLFERHRTDGDRLFIGWRRRGESGSNSG--
                *********************:*:*******:*:*** * .********* ::.: .   

AT3G11580.1     -VSVVSQEALVNTT-------AYWS-GLTTP--------------YRQVHASTTYPNI-H
gm004534_Glyma0 HVSSRKSGGDGNSSKNEGDVGVGWTRGF-YPAHHPYPTHHHHPSPYHH-----------Q
pt007926_POPTR_ -VMVQGSGGGV------------WSRGILYPSSSSGPHHLSSSNIQHDLGANVTAANVPY
                 *    . .              *: *:  *               :.            

AT3G11580.1     QEYSHYG--AVVDHAQSIPPV------VAGSSRTVRLFGVNLECH--GDAVEP-------
gm004534_Glyma0 QDDSLHAVRGSQGQNQRTRPVGNSSSSSSSSSRVLRLFGVNMECQPEHDDSGPSTPQCSY
pt007926_POPTR_ QPYCLHA--GSIAQNQTTP---------LGNSKRLRLFGVNLECQ--LDGSEPSTPDGS-
                *  . :.  .   : *             ..*: :******:**:   *   *       

AT3G11580.1     --------------PPRPDVYNDQHIYYYSTPHPMNISFAGEALEQVGDGRG
gm004534_Glyma0 NTNNILPSTQGTDIHSHLNFYQQQQ-TSNSKPPPHHMMIRHQPYYY------
pt007926_POPTR_ -------SVSSLQGPGHPQFYSQSSYSSNSTHGQMDIPFSGD-VHRMRNRRG
                                : :.*.:.     *.    .: :  :
BoxShade v3.31 C (beta, 970507) Output
AT3G11580.1     M S V N H Y - - - - H N T L S L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H H - - - -
gm004534_Glyma0    M S T N H Y T M D L P E P T L W W P H P H Q Q Q L T L I D P D P - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007926_POPTR_    M S I N H F S T D L Q E T L S W W A Q Q H Q Q Q Q P I M E P N P N A S S S T P N E P P N I S N P N S S W P P H H S W L N
 
AT3G11580.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H H Q - - - - - - - - - N D V A I A Q R E S L F E K S
gm004534_Glyma0    - - - - - - - - - - - - L P L N - - L N N D D N D N G D D N D N D E N Q T V T T T T T G G E E E I I N N K E P M F E K P
pt007926_POPTR_    P Y N T A Q Q P S S M F L P Q N P T L N F N L N E E - D D E D Q D H E Q Q Q Q D E T Q Q E Q E V L V L D K E P M F E K P
 
AT3G11580.1     L T P S D V G K L N R L V I P K Q H A E K Y F P L N N N N N N G G S G D D V A T T E K G M L L S F E D E S G K C W K F R
gm004534_Glyma0    L T P S D V G K L N R L V I P K Q H A E K Y F P L S - - - - - - - G G D S G S S E C K G L L L S F E D E S G K C W R F R
pt007926_POPTR_    L T P S D V G K L N R L V I P K Q H A E K Y F P L - - - - - - - - S G D S V - - - D K G L L L S F E D E S G R Y W K F R
 
AT3G11580.1     Y S Y W N S S Q S Y V L T K G W S R Y V K D K H L D A G D V V F F Q R H R F D L H R L F I G W R R R G E A S S S P A - -
gm004534_Glyma0    Y S Y W N S S Q S Y V L T K G W S R Y V K D K R L D A G D V V L F Q R H R A D A Q R L F I G W R R R R Q S D A L P P P A
pt007926_POPTR_    Y S Y W N S S Q S Y V L T K G W S R Y V K E K Q L D A G D V V L F E R H R T D G D R L F I G W R R R G E S G S N S G - -
 
AT3G11580.1     - V S V V S Q E A L V N T T - - - - - - - A Y W S - G L T T P - - - - - - - - - - - - - - Y R Q V H A S T T Y P N I - H
gm004534_Glyma0    H V S S R K S G G D G N S S K N E G D V G V G W T R G F - Y P A H H P Y P T H H H H P S P Y H H - - - - - - - - - - - Q
pt007926_POPTR_    - V M V Q G S G G G V - - - - - - - - - - - - W S R G I L Y P S S S S G P H H L S S S N I Q H D L G A N V T A A N V P Y
 
AT3G11580.1     Q E Y S H Y G - - A V V D H A Q S I P P V - - - - - - V A G S S R T V R L F G V N L E C H - - G D A V E P - - - - - - -
gm004534_Glyma0    Q D D S L H A V R G S Q G Q N Q R T R P V G N S S S S S S S S S R V L R L F G V N M E C Q P E H D D S G P S T P Q C S Y
pt007926_POPTR_    Q P Y C L H A - - G S I A Q N Q T T P - - - - - - - - - L G N S K R L R L F G V N L E C Q - - L D G S E P S T P D G S -
 
AT3G11580.1     - - - - - - - - - - - - - - P P R P D V Y N D Q H I Y Y Y S T P H P M N I S F A G E A L E Q V G D G R G
gm004534_Glyma0    N T N N I L P S T Q G T D I H S H L N F Y Q Q Q Q - T S N S K P P P H H M M I R H Q P Y Y Y - - - - - -
pt007926_POPTR_    - - - - - - - S V S S L Q G P G H P Q F Y S Q S S Y S S N S T H G Q M D I P F S G D - V H R M R N R R G
 
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