fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11580.1 SSRTVRLFGVNLECH at 213/267 in AT3G11580.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004534 SSRVLRLFGVNMECQ in 275/344 AT2G36080.1 1st_not 0.412244897 II
Pt007926 NSKRLRLFGVNLECQ in 298/363 AT2G36080.1 1st_not 0.438775510 II
Pt007927 NSKRLRLFGVNLECQ in 298/353 AT2G36080.1 not_not 0.426530612 III
Pt044322 NSRRLRLFGVNLECQ in 176/241 AT2G36080.1 not_not 0.416326530 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G11580.1     MSVNHYHNTLS------LHHHHQN------------------------------------
pt007926_POPTR_ MSINHFSTDLQETLSWWAQQHQQQQPIMEPNPNASSSTPNEPPNISNPNSSWPPHHSWLN
pt044322_POPTR_ ------------------------------------------------------------
pt007927_POPTR_ MSINHFSTDLQETLSWWAQQHQQQQPIMEPNPNASSSTPNEPPNISNPNSSWPPHHSWLN
gm004534_Glyma0 MSTNHYTMDLPEPTLWWPHPHQQQLTLIDPDP----------------------------
                                                                            

AT3G11580.1     ----------------------------------------------DVAIAQRESLFEKS
pt007926_POPTR_ PYNTAQQPSSMFLPQNPTLNFNLNEE-DDEDQDHEQQQQDETQQEQEVLVLDKEPMFEKP
pt044322_POPTR_ -------------------------------------------------------MFEKP
pt007927_POPTR_ PYNTAQQPSSMFLPQNPTLNFNLNEE-DDEDQDHEQQQQDETQQEQEVLVLDKEPMFEKP
gm004534_Glyma0 ------------LPLN--LNNDDNDNGDDNDNDENQTVTTTTTGGEEEIINNKEPMFEKP
                                                                       :***.

AT3G11580.1     LTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGKCWKFR
pt007926_POPTR_ LTPSDVGKLNRLVIPKQHAEKYFPL--------SGD---SVDKGLLLSFEDESGRYWKFR
pt044322_POPTR_ LTPSDVGKLNRLVIPKQHAEKYFPL--------SGD---SVDKGLLLSFEDESGKYWRFR
pt007927_POPTR_ LTPSDVGKLNRLVIPKQHAEKYFPL--------SGD---SVDKGLLLSFEDESGRYWKFR
gm004534_Glyma0 LTPSDVGKLNRLVIPKQHAEKYFPLS----GGDSGS---SECKGLLLSFEDESGKCWRFR
                *************************        **.   :  **:*********: *:**

AT3G11580.1     YSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRRRGEASS-SPAV
pt007926_POPTR_ YSYWNSSQSYVLTKGWSRYVKEKQLDAGDVVLFERHRTDGDRLFIGWRRRGE--------
pt044322_POPTR_ YSYWNSSQSYVLTKGWSRYVKEKQLDAGDAVLFERHRTDGDRLFIGWRRRGEM-------
pt007927_POPTR_ YSYWNSSQSYVLTKGWSRYVKEKQLDAGDVVLFERHRTDGDRLFIGWRRRGE--------
gm004534_Glyma0 YSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRADAQRLFIGWRRRRQSDALPPPA
                *********************:*:*****.*:*:*** * .********* :        

AT3G11580.1     SVVSQEALVNTTAY---------WS-GL-------------TTPYRQVHAST-TYPNI-H
pt007926_POPTR_ -------SGSNSGVMVQGSGGGVWSRGILYPSSSSGPHHLSSSNIQHDLGANVTAANVPY
pt044322_POPTR_ ---SSSSSANNSGVMVQGSGGGAWRRGLYSSPSSSGPYHLSGSNMQHGHGAN--------
pt007927_POPTR_ -------SGSNSGVMVQGSGGGVWSRGILYPSSSSGPHHLSSSNIQHDLGANVTAANVPY
gm004534_Glyma0 HVSSRKSGGDGNSSKNEGDVGVGWTRGFYPAHHPYPTHHHHPSPYHHQQDDS--------
                         . ..          *  *:              :  ::    .        

AT3G11580.1     QEY-SHY--GAVVDHAQSIPPVVAGS--------SRTVRLFGVNLECH--GDAVEPPPRP
pt007926_POPTR_ QPYCLHA--GSIAQNQTT-PL---GN--------SKRLRLFGVNLECQ--LDGSEPST-P
pt044322_POPTR_ -----HD--TEMGDFLGT-QP---GN--------SRRLRLFGVNLECQ--LDEAEPPT-P
pt007927_POPTR_ QPYCLHA--GSIAQNQTT-PL---GN--------SKRLRLFGVNLECQ--LDGSEPST-P
gm004534_Glyma0 ----LHAVRGSQGQNQRTRPV---GNSSSSSSSSSRVLRLFGVNMECQPEHDDSGPST-P
                     *       :   :      *.        *: :******:**:   *   *.. *

AT3G11580.1     DVYND--------------QHIYYYSTP----------HPMNISFAGEALEQVGDGRG
pt007926_POPTR_ DGSS-----VSSLQGP---GHPQFYSQSSYSSNST---HGQMDIPFSGDVHRMRNRRG
pt044322_POPTR_ DGSS-----LSSLQGP---VHQQFYSQPAYSSNST---HSQMGSTFSRDVKQMRNRRG
pt007927_POPTR_ DGSS-----VSSLQGP---GHPQFYSQSSYSSNST---HGQM-------VSHMTL---
gm004534_Glyma0 QCSYNTNNILPSTQGTDIHSHLNFYQQQQ-TSNSKPPPHHMM-------IRHQPYYY-
                :                   *  :*.            *          : :
BoxShade v3.31 C (beta, 970507) Output
AT3G11580.1     M S V N H Y H N T L S - - - - - - L H H H H Q N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007926_POPTR_    M S I N H F S T D L Q E T L S W W A Q Q H Q Q Q Q P I M E P N P N A S S S T P N E P P N I S N P N S S W P P H H S W L N
pt044322_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007927_POPTR_    M S I N H F S T D L Q E T L S W W A Q Q H Q Q Q Q P I M E P N P N A S S S T P N E P P N I S N P N S S W P P H H S W L N
gm004534_Glyma0    M S T N H Y T M D L P E P T L W W P H P H Q Q Q L T L I D P D P - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G11580.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D V A I A Q R E S L F E K S
pt007926_POPTR_    P Y N T A Q Q P S S M F L P Q N P T L N F N L N E E - D D E D Q D H E Q Q Q Q D E T Q Q E Q E V L V L D K E P M F E K P
pt044322_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M F E K P
pt007927_POPTR_    P Y N T A Q Q P S S M F L P Q N P T L N F N L N E E - D D E D Q D H E Q Q Q Q D E T Q Q E Q E V L V L D K E P M F E K P
gm004534_Glyma0    - - - - - - - - - - - - L P L N - - L N N D D N D N G D D N D N D E N Q T V T T T T T G G E E E I I N N K E P M F E K P
 
AT3G11580.1     L T P S D V G K L N R L V I P K Q H A E K Y F P L N N N N N N G G S G D D V A T T E K G M L L S F E D E S G K C W K F R
pt007926_POPTR_    L T P S D V G K L N R L V I P K Q H A E K Y F P L - - - - - - - - S G D - - - S V D K G L L L S F E D E S G R Y W K F R
pt044322_POPTR_    L T P S D V G K L N R L V I P K Q H A E K Y F P L - - - - - - - - S G D - - - S V D K G L L L S F E D E S G K Y W R F R
pt007927_POPTR_    L T P S D V G K L N R L V I P K Q H A E K Y F P L - - - - - - - - S G D - - - S V D K G L L L S F E D E S G R Y W K F R
gm004534_Glyma0    L T P S D V G K L N R L V I P K Q H A E K Y F P L S - - - - G G D S G S - - - S E C K G L L L S F E D E S G K C W R F R
 
AT3G11580.1     Y S Y W N S S Q S Y V L T K G W S R Y V K D K H L D A G D V V F F Q R H R F D L H R L F I G W R R R G E A S S - S P A V
pt007926_POPTR_    Y S Y W N S S Q S Y V L T K G W S R Y V K E K Q L D A G D V V L F E R H R T D G D R L F I G W R R R G E - - - - - - - -
pt044322_POPTR_    Y S Y W N S S Q S Y V L T K G W S R Y V K E K Q L D A G D A V L F E R H R T D G D R L F I G W R R R G E M - - - - - - -
pt007927_POPTR_    Y S Y W N S S Q S Y V L T K G W S R Y V K E K Q L D A G D V V L F E R H R T D G D R L F I G W R R R G E - - - - - - - -
gm004534_Glyma0    Y S Y W N S S Q S Y V L T K G W S R Y V K D K R L D A G D V V L F Q R H R A D A Q R L F I G W R R R R Q S D A L P P P A
 
AT3G11580.1     S V V S Q E A L V N T T A Y - - - - - - - - - W S - G L - - - - - - - - - - - - - T T P Y R Q V H A S T - T Y P N I - H
pt007926_POPTR_    - - - - - - - S G S N S G V M V Q G S G G G V W S R G I L Y P S S S S G P H H L S S S N I Q H D L G A N V T A A N V P Y
pt044322_POPTR_    - - - S S S S S A N N S G V M V Q G S G G G A W R R G L Y S S P S S S G P Y H L S G S N M Q H G H G A N - - - - - - - -
pt007927_POPTR_    - - - - - - - S G S N S G V M V Q G S G G G V W S R G I L Y P S S S S G P H H L S S S N I Q H D L G A N V T A A N V P Y
gm004534_Glyma0    H V S S R K S G G D G N S S K N E G D V G V G W T R G F Y P A H H P Y P T H H H H P S P Y H H Q Q D D S - - - - - - - -
 
AT3G11580.1     Q E Y - S H Y - - G A V V D H A Q S I P P V V A G S - - - - - - - - S R T V R L F G V N L E C H - - G D A V E P P P R P
pt007926_POPTR_    Q P Y C L H A - - G S I A Q N Q T T - P L - - - G N - - - - - - - - S K R L R L F G V N L E C Q - - L D G S E P S T - P
pt044322_POPTR_    - - - - - H D - - T E M G D F L G T - Q P - - - G N - - - - - - - - S R R L R L F G V N L E C Q - - L D E A E P P T - P
pt007927_POPTR_    Q P Y C L H A - - G S I A Q N Q T T - P L - - - G N - - - - - - - - S K R L R L F G V N L E C Q - - L D G S E P S T - P
gm004534_Glyma0    - - - - L H A V R G S Q G Q N Q R T R P V - - - G N S S S S S S S S S R V L R L F G V N M E C Q P E H D D S G P S T - P
 
AT3G11580.1     D V Y N D - - - - - - - - - - - - - - Q H I Y Y Y S T P - - - - - - - - - - H P M N I S F A G E A L E Q V G D G R G
pt007926_POPTR_    D G S S - - - - - V S S L Q G P - - - G H P Q F Y S Q S S Y S S N S T - - - H G Q M D I P F S G D V H R M R N R R G
pt044322_POPTR_    D G S S - - - - - L S S L Q G P - - - V H Q Q F Y S Q P A Y S S N S T - - - H S Q M G S T F S R D V K Q M R N R R G
pt007927_POPTR_    D G S S - - - - - V S S L Q G P - - - G H P Q F Y S Q S S Y S S N S T - - - H G Q M - - - - - - - V S H M T L - - -
gm004534_Glyma0    Q C S Y N T N N I L P S T Q G T D I H S H L N F Y Q Q Q Q - T S N S K P P P H H M M - - - - - - - I R H Q P Y Y Y -
 
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