fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11580.1 SSRTVRLFGVNLECH at 213/267 in AT3G11580.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007926 NSKRLRLFGVNLECQ in 298/363 AT2G36080.1 1st_not 0.438775510 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G11580.1     MSVNHY----HNTLSL--------------------------------------HH----
pt007926_POPTR_ MSINHFSTDLQETLSWWAQQHQQQQPIMEPNPNASSSTPNEPPNISNPNSSWPPHHSWLN
                **:**:    ::***                                       **    

AT3G11580.1     --------------------------------HHQ---------NDVAIAQRESLFEKSL
pt007926_POPTR_ PYNTAQQPSSMFLPQNPTLNFNLNEEDDEDQDHEQQQQDETQQEQEVLVLDKEPMFEKPL
                                                *.*         ::* : ::*.:***.*

AT3G11580.1     TPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGKCWKFRY
pt007926_POPTR_ TPSDVGKLNRLVIPKQHAEKYFPL--------SGDSV---DKGLLLSFEDESGRYWKFRY
                ************************        ***.*   :**:*********: *****

AT3G11580.1     SYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRRRGEASSSPAVSV
pt007926_POPTR_ SYWNSSQSYVLTKGWSRYVKEKQLDAGDVVLFERHRTDGDRLFIGWRRRGESGSNSGVMV
                ********************:*:*******:*:*** * .***********:.*...* *

AT3G11580.1     VSQEALVNTTAYWS-GLTTP--------------YRQVHASTTYPNI-HQEYSHYGAVVD
pt007926_POPTR_ QGSGGGV-----WSRGILYPSSSSGPHHLSSSNIQHDLGANVTAANVPYQPYCLHAGSIA
                 .. . *     ** *:  *               ::: *..* .*: :* *. :.. : 

AT3G11580.1     HAQSIPPVVAGSSRTVRLFGVNLECHGDAVEP-------------PPRPDVYNDQHIYYY
pt007926_POPTR_ QNQTTP---LGNSKRLRLFGVNLECQLDGSEPSTPDGSSVSSLQGPGHPQFYSQSSYSSN
                : *: *    *.*: :*********: *. **             * :*:.*.:.     

AT3G11580.1     STPHPMNISFAGEALEQVGDGRG
pt007926_POPTR_ STHGQMDIPFSGD-VHRMRNRRG
                **   *:*.*:*: :.:: : **
BoxShade v3.31 C (beta, 970507) Output
AT3G11580.1     M S V N H Y - - - - H N T L S L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H H - - - -
pt007926_POPTR_    M S I N H F S T D L Q E T L S W W A Q Q H Q Q Q Q P I M E P N P N A S S S T P N E P P N I S N P N S S W P P H H S W L N
 
AT3G11580.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H H Q - - - - - - - - - N D V A I A Q R E S L F E K S L
pt007926_POPTR_    P Y N T A Q Q P S S M F L P Q N P T L N F N L N E E D D E D Q D H E Q Q Q Q D E T Q Q E Q E V L V L D K E P M F E K P L
 
AT3G11580.1     T P S D V G K L N R L V I P K Q H A E K Y F P L N N N N N N G G S G D D V A T T E K G M L L S F E D E S G K C W K F R Y
pt007926_POPTR_    T P S D V G K L N R L V I P K Q H A E K Y F P L - - - - - - - - S G D S V - - - D K G L L L S F E D E S G R Y W K F R Y
 
AT3G11580.1     S Y W N S S Q S Y V L T K G W S R Y V K D K H L D A G D V V F F Q R H R F D L H R L F I G W R R R G E A S S S P A V S V
pt007926_POPTR_    S Y W N S S Q S Y V L T K G W S R Y V K E K Q L D A G D V V L F E R H R T D G D R L F I G W R R R G E S G S N S G V M V
 
AT3G11580.1     V S Q E A L V N T T A Y W S - G L T T P - - - - - - - - - - - - - - Y R Q V H A S T T Y P N I - H Q E Y S H Y G A V V D
pt007926_POPTR_    Q G S G G G V - - - - - W S R G I L Y P S S S S G P H H L S S S N I Q H D L G A N V T A A N V P Y Q P Y C L H A G S I A
 
AT3G11580.1     H A Q S I P P V V A G S S R T V R L F G V N L E C H G D A V E P - - - - - - - - - - - - - P P R P D V Y N D Q H I Y Y Y
pt007926_POPTR_    Q N Q T T P - - - L G N S K R L R L F G V N L E C Q L D G S E P S T P D G S S V S S L Q G P G H P Q F Y S Q S S Y S S N
 
AT3G11580.1     S T P H P M N I S F A G E A L E Q V G D G R G
pt007926_POPTR_    S T H G Q M D I P F S G D - V H R M R N R R G
 
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