fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11580.1 SSRTVRLFGVNLECH at 213/267 in AT3G11580.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007927 NSKRLRLFGVNLECQ in 298/353 AT2G36080.1 not_not 0.426530612 III
Pt044322 NSRRLRLFGVNLECQ in 176/241 AT2G36080.1 not_not 0.416326530 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G11580.1     MSVNHY----HNTLSL--------------------------------------HH----
pt044322_POPTR_ ------------------------------------------------------------
pt007927_POPTR_ MSINHFSTDLQETLSWWAQQHQQQQPIMEPNPNASSSTPNEPPNISNPNSSWPPHHSWLN
                                                                            

AT3G11580.1     --------------------------------HHQ---------NDVAIAQRESLFEKSL
pt044322_POPTR_ ------------------------------------------------------MFEKPL
pt007927_POPTR_ PYNTAQQPSSMFLPQNPTLNFNLNEEDDEDQDHEQQQQDETQQEQEVLVLDKEPMFEKPL
                                                                      :***.*

AT3G11580.1     TPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGKCWKFRY
pt044322_POPTR_ TPSDVGKLNRLVIPKQHAEKYFPL--------SGDSV---DKGLLLSFEDESGKYWRFRY
pt007927_POPTR_ TPSDVGKLNRLVIPKQHAEKYFPL--------SGDSV---DKGLLLSFEDESGRYWKFRY
                ************************        ***.*   :**:*********: *:***

AT3G11580.1     SYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLHRLFIGWRRRGEASSSPAVSV
pt044322_POPTR_ SYWNSSQSYVLTKGWSRYVKEKQLDAGDAVLFERHRTDGDRLFIGWRRRGEMSSS--SSA
pt007927_POPTR_ SYWNSSQSYVLTKGWSRYVKEKQLDAGDVVLFERHRTDGDRLFIGWRRRGE-------SG
                ********************:*:*****.*:*:*** * .***********       * 

AT3G11580.1     VSQEALVNTT--AYWS-GL------TTPYRQVHASTTYPNIHQEYS--------------
pt044322_POPTR_ NNSGVMVQGSGGGAWRRGLYSSPSSSGPY---HLSGS--NMQHGHGAN------------
pt007927_POPTR_ SNSGVMVQGSGGGVWSRGILYPSSSSGPH---HLSSS--NIQHDLGANVTAANVPYQPYC
                 .. .:*: :  . *  *:      : *:   * * :  *:::  .              

AT3G11580.1     -HYGAVVDHAQSIPPVVAGSSRTVRLFGVNLECHGDAVEPPPRPD------VYNDQHIYY
pt044322_POPTR_ -HDTEMGDFLGTQP----GNSRRLRLFGVNLECQLDEAEPPT-PDGSSLSSLQGPVHQQF
pt007927_POPTR_ LHAGSIAQNQTTPL----GNSKRLRLFGVNLECQLDGSEPST-PDGSSVSSLQGPGHPQF
                 *   : :   :      *.*: :*********: *  **.. **      : .  *  :

AT3G11580.1     YSTP-------HPMNISFAGEALEQVGDGRG
pt044322_POPTR_ YSQPAYSSNSTHSQMGSTFSRDVKQMRNRRG
pt007927_POPTR_ YSQSSYSSNSTHGQMVSHMTL----------
                ** .       *    *
BoxShade v3.31 C (beta, 970507) Output
AT3G11580.1     M S V N H Y - - - - H N T L S L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H H - - - -
pt044322_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007927_POPTR_    M S I N H F S T D L Q E T L S W W A Q Q H Q Q Q Q P I M E P N P N A S S S T P N E P P N I S N P N S S W P P H H S W L N
 
AT3G11580.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H H Q - - - - - - - - - N D V A I A Q R E S L F E K S L
pt044322_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M F E K P L
pt007927_POPTR_    P Y N T A Q Q P S S M F L P Q N P T L N F N L N E E D D E D Q D H E Q Q Q Q D E T Q Q E Q E V L V L D K E P M F E K P L
 
AT3G11580.1     T P S D V G K L N R L V I P K Q H A E K Y F P L N N N N N N G G S G D D V A T T E K G M L L S F E D E S G K C W K F R Y
pt044322_POPTR_    T P S D V G K L N R L V I P K Q H A E K Y F P L - - - - - - - - S G D S V - - - D K G L L L S F E D E S G K Y W R F R Y
pt007927_POPTR_    T P S D V G K L N R L V I P K Q H A E K Y F P L - - - - - - - - S G D S V - - - D K G L L L S F E D E S G R Y W K F R Y
 
AT3G11580.1     S Y W N S S Q S Y V L T K G W S R Y V K D K H L D A G D V V F F Q R H R F D L H R L F I G W R R R G E A S S S P A V S V
pt044322_POPTR_    S Y W N S S Q S Y V L T K G W S R Y V K E K Q L D A G D A V L F E R H R T D G D R L F I G W R R R G E M S S S - - S S A
pt007927_POPTR_    S Y W N S S Q S Y V L T K G W S R Y V K E K Q L D A G D V V L F E R H R T D G D R L F I G W R R R G E - - - - - - - S G
 
AT3G11580.1     V S Q E A L V N T T - - A Y W S - G L - - - - - - T T P Y R Q V H A S T T Y P N I H Q E Y S - - - - - - - - - - - - - -
pt044322_POPTR_    N N S G V M V Q G S G G G A W R R G L Y S S P S S S G P Y - - - H L S G S - - N M Q H G H G A N - - - - - - - - - - - -
pt007927_POPTR_    S N S G V M V Q G S G G G V W S R G I L Y P S S S S G P H - - - H L S S S - - N I Q H D L G A N V T A A N V P Y Q P Y C
 
AT3G11580.1     - H Y G A V V D H A Q S I P P V V A G S S R T V R L F G V N L E C H G D A V E P P P R P D - - - - - - V Y N D Q H I Y Y
pt044322_POPTR_    - H D T E M G D F L G T Q P - - - - G N S R R L R L F G V N L E C Q L D E A E P P T - P D G S S L S S L Q G P V H Q Q F
pt007927_POPTR_    L H A G S I A Q N Q T T P L - - - - G N S K R L R L F G V N L E C Q L D G S E P S T - P D G S S V S S L Q G P G H P Q F
 
AT3G11580.1     Y S T P - - - - - - - H P M N I S F A G E A L E Q V G D G R G
pt044322_POPTR_    Y S Q P A Y S S N S T H S Q M G S T F S R D V K Q M R N R R G
pt007927_POPTR_    Y S Q S S Y S S N S T H G Q M V S H M T L - - - - - - - - - -
 
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