fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G11580.1 SSRTVRLFGVNLECH at 213/267 in AT3G11580.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004534 SSRVLRLFGVNMECQ in 275/344 AT2G36080.1 1st_not 0.412244897 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G11580.1     MSVNHY-----HNTLSLHHHHQNDVA----------------------------------
gm004534_Glyma0 MSTNHYTMDLPEPTLWWPHPHQQQLTLIDPDPLPLNLNNDDNDNGDDNDNDENQTVTTTT
                **.***     . **   * **::::                                  

AT3G11580.1     -------IAQRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTE
gm004534_Glyma0 TGGEEEIINNKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPL--------SGGDSGSSE
                       * ::*.:***.*************************        **.* .::*

AT3G11580.1     -KGMLLSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLH
gm004534_Glyma0 CKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRADAQ
                 **:************:*************************:*******:***** * :

AT3G11580.1     RLFIGWRRRGEASSSPAVSVVSQE-------ALVNTTAYWSGLTTPYRQVHASTTYPNIH
gm004534_Glyma0 RLFIGWRRRRQSDALPPPAHVSSRKSGGDGNSSKNEGDVGVGWTRGFYPAHHP--YPTHH
                ********* ::.: *. : **..       :  *      * *  :  .* .  **. *

AT3G11580.1     QEYSHYGAVVD---HA--------QSIPPV------VAGSSRTVRLFGVNLEC---HGDA
gm004534_Glyma0 HHPSPYHHQQDDSLHAVRGSQGQNQRTRPVGNSSSSSSSSSRVLRLFGVNMECQPEHDDS
                :. * *    *   **        *   **       :.***.:******:**   *.*:

AT3G11580.1     VEPPPR--------------PDVYNDQHIYYY-------STPHPMNISFAGEALEQVGDG
gm004534_Glyma0 GPSTPQCSYNTNNILPSTQGTDIHS--HLNFYQQQQTSNSKPPPHHMMIRHQPYYY----
                  ..*:              .*::.  *: :*       *.* * :: :  :.       

AT3G11580.1     RG
gm004534_Glyma0 --
BoxShade v3.31 C (beta, 970507) Output
AT3G11580.1     M S V N H Y - - - - - H N T L S L H H H H Q N D V A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm004534_Glyma0    M S T N H Y T M D L P E P T L W W P H P H Q Q Q L T L I D P D P L P L N L N N D D N D N G D D N D N D E N Q T V T T T T
 
AT3G11580.1     - - - - - - - I A Q R E S L F E K S L T P S D V G K L N R L V I P K Q H A E K Y F P L N N N N N N G G S G D D V A T T E
gm004534_Glyma0    T G G E E E I I N N K E P M F E K P L T P S D V G K L N R L V I P K Q H A E K Y F P L - - - - - - - - S G G D S G S S E
 
AT3G11580.1     - K G M L L S F E D E S G K C W K F R Y S Y W N S S Q S Y V L T K G W S R Y V K D K H L D A G D V V F F Q R H R F D L H
gm004534_Glyma0    C K G L L L S F E D E S G K C W R F R Y S Y W N S S Q S Y V L T K G W S R Y V K D K R L D A G D V V L F Q R H R A D A Q
 
AT3G11580.1     R L F I G W R R R G E A S S S P A V S V V S Q E - - - - - - - A L V N T T A Y W S G L T T P Y R Q V H A S T T Y P N I H
gm004534_Glyma0    R L F I G W R R R R Q S D A L P P P A H V S S R K S G G D G N S S K N E G D V G V G W T R G F Y P A H H P - - Y P T H H
 
AT3G11580.1     Q E Y S H Y G A V V D - - - H A - - - - - - - - Q S I P P V - - - - - - V A G S S R T V R L F G V N L E C - - - H G D A
gm004534_Glyma0    H H P S P Y H H Q Q D D S L H A V R G S Q G Q N Q R T R P V G N S S S S S S S S S R V L R L F G V N M E C Q P E H D D S
 
AT3G11580.1     V E P P P R - - - - - - - - - - - - - - P D V Y N D Q H I Y Y Y - - - - - - - S T P H P M N I S F A G E A L E Q V G D G
gm004534_Glyma0    G P S T P Q C S Y N T N N I L P S T Q G T D I H S - - H L N F Y Q Q Q Q T S N S K P P P H H M M I R H Q P Y Y Y - - - -
 
AT3G11580.1     R G
gm004534_Glyma0    - -
 
0