Input
| Putative repression domain
|
|
AT3G11580.1 |
SSRTVRLFGVNLECH at 213/267 in AT3G11580.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm004534 |
SSRVLRLFGVNMECQ in 275/344 |
AT2G36080.1 |
1st_not |
0.412244897 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G11580.1 MSVNHY-----HNTLSLHHHHQNDVA----------------------------------
gm004534_Glyma0 MSTNHYTMDLPEPTLWWPHPHQQQLTLIDPDPLPLNLNNDDNDNGDDNDNDENQTVTTTT
**.*** . ** * **::::
AT3G11580.1 -------IAQRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTE
gm004534_Glyma0 TGGEEEIINNKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPL--------SGGDSGSSE
* ::*.:***.************************* **.* .::*
AT3G11580.1 -KGMLLSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDLH
gm004534_Glyma0 CKGLLLSFEDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRADAQ
**:************:*************************:*******:***** * :
AT3G11580.1 RLFIGWRRRGEASSSPAVSVVSQE-------ALVNTTAYWSGLTTPYRQVHASTTYPNIH
gm004534_Glyma0 RLFIGWRRRRQSDALPPPAHVSSRKSGGDGNSSKNEGDVGVGWTRGFYPAHHP--YPTHH
********* ::.: *. : **.. : * * * : .* . **. *
AT3G11580.1 QEYSHYGAVVD---HA--------QSIPPV------VAGSSRTVRLFGVNLEC---HGDA
gm004534_Glyma0 HHPSPYHHQQDDSLHAVRGSQGQNQRTRPVGNSSSSSSSSSRVLRLFGVNMECQPEHDDS
:. * * * ** * ** :.***.:******:** *.*:
AT3G11580.1 VEPPPR--------------PDVYNDQHIYYY-------STPHPMNISFAGEALEQVGDG
gm004534_Glyma0 GPSTPQCSYNTNNILPSTQGTDIHS--HLNFYQQQQTSNSKPPPHHMMIRHQPYYY----
..*: .*::. *: :* *.* * :: : :.
AT3G11580.1 RG
gm004534_Glyma0 --
BoxShade v3.31 C (beta, 970507) Output
AT3G11580.1 |
M |
S |
V |
N |
H |
Y |
- |
- |
- |
- |
- |
H |
N |
T |
L |
S |
L |
H |
H |
H |
H |
Q |
N |
D |
V |
A |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
gm004534_Glyma0 |
M |
S |
T |
N |
H |
Y |
T |
M |
D |
L |
P |
E |
P |
T |
L |
W |
W |
P |
H |
P |
H |
Q |
Q |
Q |
L |
T |
L |
I |
D |
P |
D |
P |
L |
P |
L |
N |
L |
N |
N |
D |
D |
N |
D |
N |
G |
D |
D |
N |
D |
N |
D |
E |
N |
Q |
T |
V |
T |
T |
T |
T |
|
AT3G11580.1 |
- |
- |
- |
- |
- |
- |
- |
I |
A |
Q |
R |
E |
S |
L |
F |
E |
K |
S |
L |
T |
P |
S |
D |
V |
G |
K |
L |
N |
R |
L |
V |
I |
P |
K |
Q |
H |
A |
E |
K |
Y |
F |
P |
L |
N |
N |
N |
N |
N |
N |
G |
G |
S |
G |
D |
D |
V |
A |
T |
T |
E |
gm004534_Glyma0 |
T |
G |
G |
E |
E |
E |
I |
I |
N |
N |
K |
E |
P |
M |
F |
E |
K |
P |
L |
T |
P |
S |
D |
V |
G |
K |
L |
N |
R |
L |
V |
I |
P |
K |
Q |
H |
A |
E |
K |
Y |
F |
P |
L |
- |
- |
- |
- |
- |
- |
- |
- |
S |
G |
G |
D |
S |
G |
S |
S |
E |
|
AT3G11580.1 |
- |
K |
G |
M |
L |
L |
S |
F |
E |
D |
E |
S |
G |
K |
C |
W |
K |
F |
R |
Y |
S |
Y |
W |
N |
S |
S |
Q |
S |
Y |
V |
L |
T |
K |
G |
W |
S |
R |
Y |
V |
K |
D |
K |
H |
L |
D |
A |
G |
D |
V |
V |
F |
F |
Q |
R |
H |
R |
F |
D |
L |
H |
gm004534_Glyma0 |
C |
K |
G |
L |
L |
L |
S |
F |
E |
D |
E |
S |
G |
K |
C |
W |
R |
F |
R |
Y |
S |
Y |
W |
N |
S |
S |
Q |
S |
Y |
V |
L |
T |
K |
G |
W |
S |
R |
Y |
V |
K |
D |
K |
R |
L |
D |
A |
G |
D |
V |
V |
L |
F |
Q |
R |
H |
R |
A |
D |
A |
Q |
|
AT3G11580.1 |
R |
L |
F |
I |
G |
W |
R |
R |
R |
G |
E |
A |
S |
S |
S |
P |
A |
V |
S |
V |
V |
S |
Q |
E |
- |
- |
- |
- |
- |
- |
- |
A |
L |
V |
N |
T |
T |
A |
Y |
W |
S |
G |
L |
T |
T |
P |
Y |
R |
Q |
V |
H |
A |
S |
T |
T |
Y |
P |
N |
I |
H |
gm004534_Glyma0 |
R |
L |
F |
I |
G |
W |
R |
R |
R |
R |
Q |
S |
D |
A |
L |
P |
P |
P |
A |
H |
V |
S |
S |
R |
K |
S |
G |
G |
D |
G |
N |
S |
S |
K |
N |
E |
G |
D |
V |
G |
V |
G |
W |
T |
R |
G |
F |
Y |
P |
A |
H |
H |
P |
- |
- |
Y |
P |
T |
H |
H |
|
AT3G11580.1 |
Q |
E |
Y |
S |
H |
Y |
G |
A |
V |
V |
D |
- |
- |
- |
H |
A |
- |
- |
- |
- |
- |
- |
- |
- |
Q |
S |
I |
P |
P |
V |
- |
- |
- |
- |
- |
- |
V |
A |
G |
S |
S |
R |
T |
V |
R |
L |
F |
G |
V |
N |
L |
E |
C |
- |
- |
- |
H |
G |
D |
A |
gm004534_Glyma0 |
H |
H |
P |
S |
P |
Y |
H |
H |
Q |
Q |
D |
D |
S |
L |
H |
A |
V |
R |
G |
S |
Q |
G |
Q |
N |
Q |
R |
T |
R |
P |
V |
G |
N |
S |
S |
S |
S |
S |
S |
S |
S |
S |
R |
V |
L |
R |
L |
F |
G |
V |
N |
M |
E |
C |
Q |
P |
E |
H |
D |
D |
S |
|
AT3G11580.1 |
V |
E |
P |
P |
P |
R |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
D |
V |
Y |
N |
D |
Q |
H |
I |
Y |
Y |
Y |
- |
- |
- |
- |
- |
- |
- |
S |
T |
P |
H |
P |
M |
N |
I |
S |
F |
A |
G |
E |
A |
L |
E |
Q |
V |
G |
D |
G |
gm004534_Glyma0 |
G |
P |
S |
T |
P |
Q |
C |
S |
Y |
N |
T |
N |
N |
I |
L |
P |
S |
T |
Q |
G |
T |
D |
I |
H |
S |
- |
- |
H |
L |
N |
F |
Y |
Q |
Q |
Q |
Q |
T |
S |
N |
S |
K |
P |
P |
P |
H |
H |
M |
M |
I |
R |
H |
Q |
P |
Y |
Y |
Y |
- |
- |
- |
- |
|
AT3G11580.1 |
R |
G |
gm004534_Glyma0 |
- |
- |
|
|