fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os019399 not found in 309aa AT3G12130.1 1st_1st 0.420673076 Ia
Sb030168 not found in 392aa AT3G12130.1 1st_1st 0.420673076 Ia
Gm052123 not found in 225aa AT3G12130.1 1st_1st 0.444711538 Ia
Pt007108 not found in 234aa AT3G12130.1 1st_1st 0.629807692 Ia
Sm018164 not found in 213aa AT3G12130.1 1st_1st 0.432692307 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12130.1     ---------------MD----TRKRGRPEAGSFNSNG-GGYKKSKQEMESYSTGLGSKSK
gm052123_Glyma1 ------------------------------------------------------------
Sb030168_Sorbi1 GFGALLQPDARARLSMEGAGAARKRSRPE----SANGYAAGGKRSKDTESFQTGQSSKSK
Os019399_Os04t0 ---------------MEGAGAARKRSRPD----TANGGAAGGKRSRETESFQTGLSSKLK
Sm018164_Selmo1 ---------------------------------------------RDLTQQTSALGSKTK
pt007108_POPTR_ ---------------MD----TRKRGRPD---FKTNGFGGFKKSKQEMDPLSTGVGSKLK
                                                                            

AT3G12130.1     PCTKFFSTSGCPFGENCHFLHYVPGGYNAVSQMTNM-GPPIPQVSRN-------------
gm052123_Glyma1 --------------------------------MMNL-TPAAPPASR---NVAALPPVPNG
Sb030168_Sorbi1 PCTKFFSTIGCPFGEGCHFLHFVPGGYPAVAKMLNLGSPAVSAPSRTHVDHAAL----TG
Os019399_Os04t0 PCTKFFSTIGCPFGEGCHFSHFVPGGYQAVAKTLNLGNPAVPAPARAPMDHAA-----GG
Sm018164_Selmo1 PCTKFFSTSGCPYGEGCHFLHYVPGGINS---LQNG-------------ATAGI----GG
pt007108_POPTR_ PCTKFFSTAGCPFGESCHFLHHVPGGYNAVTQMMNL-GPTVTPPSRS-------------
                                                  *                         

AT3G12130.1     --------------------------------------------------MQGSGNGGRF
gm052123_Glyma1 SAPPAV--KTRICNKFNTAEGCKFGDKCHFAHGEWELGKHIAPSFDDHR-TMGPTGVGRL
Sb030168_Sorbi1 ASHQASMGKTRMCTKYNTTEGCKFGDKCHFAHSERELGK---PAYMSHE---GPPMGGRY
Os019399_Os04t0 NSHPASSGKTRMCTKYNTAEGCKFGDKCHFAHGERELGK---PAYMSHESAMAPPMGGRY
Sm018164_Selmo1 AA--ALINGTTVFSSNPVATSVYYG-----------------------------------
pt007108_POPTR_ --------------------------------------------------VPGH-LGGRV
                                                                            

AT3G12130.1     SGRGESGPG-----HVSNFGDSA-TARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQ
gm052123_Glyma1 AGRMEPPPG-----PAASFGANA-TAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIR
Sb030168_Sorbi1 GGRPEPLQQASMGPPAGNFGASA-TAKISVDASLAGGIIGKGGVNTKQISRVTGVKLSIR
Os019399_Os04t0 GGRPEPPPPAAMGPPAGNFGASA-TAKISVDASLAGGIIGKGGVNTKQICRVTGVKLSIR
Sm018164_Selmo1 ----EPTPPGV--PAATTFGSIS-VTRMSIEAAYAGAIIGKAGANVKQISKVTGCKVSIR
pt007108_POPTR_ E---QPSPG-----PATSFGVFATTTRISVNASLAGFIIGKGGVHSIQICHQTGVKLSIK
                    :.         . .**  : .:::*::*: ** ****.*.   **.: ** *:**:

AT3G12130.1     DHERDPNLKNIVLEGTLEQISEASAMVKDLIGRLNSA-AKKPPGGGLGGGGGMGSEGKPH
gm052123_Glyma1 EHESDPNLRNIELEGSFEQIKEASNMVKDLLLTLQMSAPPKTTPGVPG---APASHG---
Sb030168_Sorbi1 DHESNPSQKNIELEGNFDQIKQASDMVRDLIATISASMPAKNLSASAA---PAGGRG-GG
Os019399_Os04t0 DHESDSNLKNIELEGNFDQIKQASNMVGELIATISPSTPAKKPAGSAA---GAAPAGRGG
Sm018164_Selmo1 DHETDPNMRNVEMEGSLEQIESASEMVRQLLQTREVAPPRGPALGS--------------
pt007108_POPTR_ EHETNPNLKNIELEGSFEQIAQASKMVEELV-KVNSAKAAAKTSGGRG--------GHAN
                :** :.. :*: :**.::** .** ** :*:   . : .     .               

AT3G12130.1     PG--SNFKTKICERFSKGNCTFGDRCHFAHGEAELRKSGIV
gm052123_Glyma1 ----SNFKTKLCENFTKGSCTFGDRCHFAHGAAELRKSGV-
Sb030168_Sorbi1 LGGRSNYKTKLCENFVKGACTFGDRCHFAHGETEQRRGAA-
Os019399_Os04t0 PGGRSNYKTKLCENFVKGTCTFGDRCHFAHGENEQRKGAA-
Sm018164_Selmo1 ----HNFKTKLCENYSSGTCTFAERCHFAHGTQELRPIIR-
pt007108_POPTR_ PG--SNYKTKLCDNFAKGSCTFGQRCHFAHGAAELRKTAA-
                     *:***:*:.: .* ***.:*******  * *
BoxShade v3.31 C (beta, 970507) Output
AT3G12130.1     - - - - - - - - - - - - - - - M D - - - - T R K R G R P E A G S F N S N G - G G Y K K S K Q E M E S Y S T G L G S K S K
gm052123_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030168_Sorbi1    G F G A L L Q P D A R A R L S M E G A G A A R K R S R P E - - - - S A N G Y A A G G K R S K D T E S F Q T G Q S S K S K
Os019399_Os04t0    - - - - - - - - - - - - - - - M E G A G A A R K R S R P D - - - - T A N G G A A G G K R S R E T E S F Q T G L S S K L K
Sm018164_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R D L T Q Q T S A L G S K T K
pt007108_POPTR_    - - - - - - - - - - - - - - - M D - - - - T R K R G R P D - - - F K T N G F G G F K K S K Q E M D P L S T G V G S K L K
 
AT3G12130.1     P C T K F F S T S G C P F G E N C H F L H Y V P G G Y N A V S Q M T N M - G P P I P Q V S R N - - - - - - - - - - - - -
gm052123_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M M N L - T P A A P P A S R - - - N V A A L P P V P N G
Sb030168_Sorbi1    P C T K F F S T I G C P F G E G C H F L H F V P G G Y P A V A K M L N L G S P A V S A P S R T H V D H A A L - - - - T G
Os019399_Os04t0    P C T K F F S T I G C P F G E G C H F S H F V P G G Y Q A V A K T L N L G N P A V P A P A R A P M D H A A - - - - - G G
Sm018164_Selmo1    P C T K F F S T S G C P Y G E G C H F L H Y V P G G I N S - - - L Q N G - - - - - - - - - - - - - A T A G I - - - - G G
pt007108_POPTR_    P C T K F F S T A G C P F G E S C H F L H H V P G G Y N A V T Q M M N L - G P T V T P P S R S - - - - - - - - - - - - -
 
AT3G12130.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q G S G N G G R F
gm052123_Glyma1    S A P P A V - - K T R I C N K F N T A E G C K F G D K C H F A H G E W E L G K H I A P S F D D H R - T M G P T G V G R L
Sb030168_Sorbi1    A S H Q A S M G K T R M C T K Y N T T E G C K F G D K C H F A H S E R E L G K - - - P A Y M S H E - - - G P P M G G R Y
Os019399_Os04t0    N S H P A S S G K T R M C T K Y N T A E G C K F G D K C H F A H G E R E L G K - - - P A Y M S H E S A M A P P M G G R Y
Sm018164_Selmo1    A A - - A L I N G T T V F S S N P V A T S V Y Y G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt007108_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V P G H - L G G R V
 
AT3G12130.1     S G R G E S G P G - - - - - H V S N F G D S A - T A R F S V D A S L A G A I I G K G G V S S K Q I C R Q T G V K L S I Q
gm052123_Glyma1    A G R M E P P P G - - - - - P A A S F G A N A - T A K I S V E A S L A G A I I G K G G V N S K Q I C R Q T G A K L S I R
Sb030168_Sorbi1    G G R P E P L Q Q A S M G P P A G N F G A S A - T A K I S V D A S L A G G I I G K G G V N T K Q I S R V T G V K L S I R
Os019399_Os04t0    G G R P E P P P P A A M G P P A G N F G A S A - T A K I S V D A S L A G G I I G K G G V N T K Q I C R V T G V K L S I R
Sm018164_Selmo1    - - - - E P T P P G V - - P A A T T F G S I S - V T R M S I E A A Y A G A I I G K A G A N V K Q I S K V T G C K V S I R
pt007108_POPTR_    E - - - Q P S P G - - - - - P A T S F G V F A T T T R I S V N A S L A G F I I G K G G V H S I Q I C H Q T G V K L S I K
 
AT3G12130.1     D H E R D P N L K N I V L E G T L E Q I S E A S A M V K D L I G R L N S A - A K K P P G G G L G G G G G M G S E G K P H
gm052123_Glyma1    E H E S D P N L R N I E L E G S F E Q I K E A S N M V K D L L L T L Q M S A P P K T T P G V P G - - - A P A S H G - - -
Sb030168_Sorbi1    D H E S N P S Q K N I E L E G N F D Q I K Q A S D M V R D L I A T I S A S M P A K N L S A S A A - - - P A G G R G - G G
Os019399_Os04t0    D H E S D S N L K N I E L E G N F D Q I K Q A S N M V G E L I A T I S P S T P A K K P A G S A A - - - G A A P A G R G G
Sm018164_Selmo1    D H E T D P N M R N V E M E G S L E Q I E S A S E M V R Q L L Q T R E V A P P R G P A L G S - - - - - - - - - - - - - -
pt007108_POPTR_    E H E T N P N L K N I E L E G S F E Q I A Q A S K M V E E L V - K V N S A K A A A K T S G G R G - - - - - - - - G H A N
 
AT3G12130.1     P G - - S N F K T K I C E R F S K G N C T F G D R C H F A H G E A E L R K S G I V
gm052123_Glyma1    - - - - S N F K T K L C E N F T K G S C T F G D R C H F A H G A A E L R K S G V -
Sb030168_Sorbi1    L G G R S N Y K T K L C E N F V K G A C T F G D R C H F A H G E T E Q R R G A A -
Os019399_Os04t0    P G G R S N Y K T K L C E N F V K G T C T F G D R C H F A H G E N E Q R K G A A -
Sm018164_Selmo1    - - - - H N F K T K L C E N Y S S G T C T F A E R C H F A H G T Q E L R P I I R -
pt007108_POPTR_    P G - - S N Y K T K L C D N F A K G S C T F G Q R C H F A H G A A E L R K T A A -
 
0