fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp023573 not found in 345aa AT3G12130.1 1st_1st 0.334134615 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12130.1     MD----TRKRGRPEAGSFN-SNG-----GGYKKSKQEMESYSTGLGSKSKPCTKFFSTSG
pp023573_Pp1s59 MDPYGPPRKRPRPESGPLNGSNGTNSGHGGGDDYNKDGSS-----GNRTKPCTKFFSTSG
                **    .*** ***:*.:* ***     ** .. ::: .*     *.::***********

AT3G12130.1     CPFGENCHFLHYVPGGYNAV---------------------------SQMTNMG------
pp023573_Pp1s59 CPYGEGCHFLHFVPGGVQSMGGLAPLANISSMGGGGARKVVGGVGLDDQGANLGGFKTRL
                **:**.*****:**** :::                           .* :*:*      

AT3G12130.1     -----PP--------------------------IPQVSRNM-------------------
pp023573_Pp1s59 CNRFDTPEGCRFSDKCHFAHGEKELRKSSNNFNTPSVERDSYARQDYSRDQGPSSASYRG
                     .*                           *.*.*:                    

AT3G12130.1     -QGSG----NGGRFSGRGESGPG---------------------HVSNFGDSATARFSVD
pp023573_Pp1s59 GSGSGMYGTNGGRF---GSGGPGGRDREASRFGSYREPTPPGMAAANSFGASSTAKISIE
                 .***    *****   *..***                      ...** *:**::*::

AT3G12130.1     ASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDLI
pp023573_Pp1s59 ASLAGAIIGKGGINAKQICRLTGAKLSIKEHETDAGLRNVEMEGSFEQIKQASQMVRHVL
                ************:.:***** **.****::** *..*:*: :**::***.:** **:.::

AT3G12130.1     GRLNSAAKKPPGGGLGGGGGMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGEAE
pp023573_Pp1s59 IHRDSVPARPPAGAV--------------SHNFKTKLCENFSKGTCTFGERCHFAHGAED
                 : :*.. :**.*.:              . *****:**.****.****:*******  :

AT3G12130.1     LR---KSGIV
pp023573_Pp1s59 LRDPYRS---
                **   :*
BoxShade v3.31 C (beta, 970507) Output
AT3G12130.1     M D - - - - T R K R G R P E A G S F N - S N G - - - - - G G Y K K S K Q E M E S Y S T G L G S K S K P C T K F F S T S G
pp023573_Pp1s59    M D P Y G P P R K R P R P E S G P L N G S N G T N S G H G G G D D Y N K D G S S - - - - - G N R T K P C T K F F S T S G
 
AT3G12130.1     C P F G E N C H F L H Y V P G G Y N A V - - - - - - - - - - - - - - - - - - - - - - - - - - - S Q M T N M G - - - - - -
pp023573_Pp1s59    C P Y G E G C H F L H F V P G G V Q S M G G L A P L A N I S S M G G G G A R K V V G G V G L D D Q G A N L G G F K T R L
 
AT3G12130.1     - - - - - P P - - - - - - - - - - - - - - - - - - - - - - - - - - I P Q V S R N M - - - - - - - - - - - - - - - - - - -
pp023573_Pp1s59    C N R F D T P E G C R F S D K C H F A H G E K E L R K S S N N F N T P S V E R D S Y A R Q D Y S R D Q G P S S A S Y R G
 
AT3G12130.1     - Q G S G - - - - N G G R F S G R G E S G P G - - - - - - - - - - - - - - - - - - - - - H V S N F G D S A T A R F S V D
pp023573_Pp1s59    G S G S G M Y G T N G G R F - - - G S G G P G G R D R E A S R F G S Y R E P T P P G M A A A N S F G A S S T A K I S I E
 
AT3G12130.1     A S L A G A I I G K G G V S S K Q I C R Q T G V K L S I Q D H E R D P N L K N I V L E G T L E Q I S E A S A M V K D L I
pp023573_Pp1s59    A S L A G A I I G K G G I N A K Q I C R L T G A K L S I K E H E T D A G L R N V E M E G S F E Q I K Q A S Q M V R H V L
 
AT3G12130.1     G R L N S A A K K P P G G G L G G G G G M G S E G K P H P G S N F K T K I C E R F S K G N C T F G D R C H F A H G E A E
pp023573_Pp1s59    I H R D S V P A R P P A G A V - - - - - - - - - - - - - - S H N F K T K L C E N F S K G T C T F G E R C H F A H G A E D
 
AT3G12130.1     L R - - - K S G I V
pp023573_Pp1s59    L R D P Y R S - - -
 
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