fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007108 not found in 234aa AT3G12130.1 1st_1st 0.629807692 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12130.1     MDTRKRGRPEAGSFNSNG-GGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHF
pt007108_POPTR_ MDTRKRGRPD---FKTNGFGGFKKSKQEMDPLSTGVGSKLKPCTKFFSTAGCPFGESCHF
                *********:   *::** **:*******:. ***:*** *********:******.***

AT3G12130.1     LHYVPGGYNAVSQMTNMGPPIPQVSRNMQGSGNGGRFSGRGESGPGHVSNFGDSA-TARF
pt007108_POPTR_ LHHVPGGYNAVTQMMNLGPTVTPPSRSVPGH-LGGRVE---QPSPGPATSFGVFATTTRI
                **:********:** *:**.:.  **.: *   ***..   :..** .:.**  * *:*:

AT3G12130.1     SVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVK
pt007108_POPTR_ SVNASLAGFIIGKGGVHSIQICHQTGVKLSIKEHETNPNLKNIELEGSFEQIAQASKMVE
                **:***** ******* * ***:********::** :****** ***::***::** **:

AT3G12130.1     DLIGRLNSA-AKKPPGGGLGGGGGMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAH
pt007108_POPTR_ ELV-KVNSAKAAAKTSGGRG--------GHANPGSNYKTKLCDNFAKGSCTFGQRCHFAH
                :*: ::*** *   ..** *        *:.:****:***:*:.*:**.****:******

AT3G12130.1     GEAELRKSGIV
pt007108_POPTR_ GAAELRKTAA-
                * *****:.
BoxShade v3.31 C (beta, 970507) Output
AT3G12130.1     M D T R K R G R P E A G S F N S N G - G G Y K K S K Q E M E S Y S T G L G S K S K P C T K F F S T S G C P F G E N C H F
pt007108_POPTR_    M D T R K R G R P D - - - F K T N G F G G F K K S K Q E M D P L S T G V G S K L K P C T K F F S T A G C P F G E S C H F
 
AT3G12130.1     L H Y V P G G Y N A V S Q M T N M G P P I P Q V S R N M Q G S G N G G R F S G R G E S G P G H V S N F G D S A - T A R F
pt007108_POPTR_    L H H V P G G Y N A V T Q M M N L G P T V T P P S R S V P G H - L G G R V E - - - Q P S P G P A T S F G V F A T T T R I
 
AT3G12130.1     S V D A S L A G A I I G K G G V S S K Q I C R Q T G V K L S I Q D H E R D P N L K N I V L E G T L E Q I S E A S A M V K
pt007108_POPTR_    S V N A S L A G F I I G K G G V H S I Q I C H Q T G V K L S I K E H E T N P N L K N I E L E G S F E Q I A Q A S K M V E
 
AT3G12130.1     D L I G R L N S A - A K K P P G G G L G G G G G M G S E G K P H P G S N F K T K I C E R F S K G N C T F G D R C H F A H
pt007108_POPTR_    E L V - K V N S A K A A A K T S G G R G - - - - - - - - G H A N P G S N Y K T K L C D N F A K G S C T F G Q R C H F A H
 
AT3G12130.1     G E A E L R K S G I V
pt007108_POPTR_    G A A E L R K T A A -
 
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