fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os019399 not found in 309aa AT3G12130.1 1st_1st 0.420673076 Ia
Os006822 not found in 300aa AT3G12130.1 not_1st 0.401442307 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12130.1     MDT----RKRGRPEAGSFNSNG--GGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFG
Os019399_Os04t0 MEGAGAARKRSRPDT----ANGGAAGGKRSR-ETESFQTGLSSKLKPCTKFFSTIGCPFG
Os006822_Os02t0 MEVGG--RKRGKPDG----ANG--AGGKRAR-ESESFQTGVGSKSKPCTKFFSTSGCPFG
                *:     ***.:*:     :**  .* *::: * **:.**:.** ********* *****

AT3G12130.1     ENCHFLHYVPGGYNAVSQMTNMGPPI--PQVSRNMQGSGN--------------------
Os019399_Os04t0 EGCHFSHFVPGGYQAVAKTLNLGNPAV-PAPARAPMDHAAGGNSHPASSGKTRMCTKYNT
Os006822_Os02t0 EGCHFLHHFPGGYQAVAKMTNLGGPAIAPPPGRMPMGNAV-PDGPPTPTVKTRLCNKYNT
                *.*** *..****:**::  *:* *   *  .*   . .                     

AT3G12130.1     -----------------------------------GGRFSGR--GESGPGHVS-----NF
Os019399_Os04t0 AEGCKFGDKCHFAHGERELGKPAYMSHESAMAPPMGGRYGGR--PEPPPPAAMGPPAGNF
Os006822_Os02t0 AEGCKWGDKCHFAHGERELGKPMLM--DSSMPPPMGPRPTGHFAPPPMPSPAMSTPA-SF
                                                   * *  *:    . *  .      .*

AT3G12130.1     GDSATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQI
Os019399_Os04t0 GASATAKISVDASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQI
Os006822_Os02t0 GASATAKISVDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQI
                * ****::********.***:***.:***.* **.**:*:*** *.***** ***.::**

AT3G12130.1     SEASAMVKDLIGRLNSA----AKKPPGGGLGG-----GGGMGSEGKPHPG--SNFKTKIC
Os019399_Os04t0 KQASNMVGELIATISPSTP--AKKPAGSAAGAAPAGRGG---------PGGRSNYKTKLC
Os006822_Os02t0 KNASAMVRELIVSIGGGAPPQGKKPVGGSHRG-----GG---------PG--SNFKTKLC
                .:** ** :**  :. .    .*** *..  .     **         **  **:***:*

AT3G12130.1     ERFSKGNCTFGDRCHFAHGEAELRKSGIV
Os019399_Os04t0 ENFVKGTCTFGDRCHFAHGENEQRKGAA-
Os006822_Os02t0 ENFTKGSCTFGDRCHFAHGENELRKSAAA
                *.* **.************* * **..
BoxShade v3.31 C (beta, 970507) Output
AT3G12130.1     M D T - - - - R K R G R P E A G S F N S N G - - G G Y K K S K Q E M E S Y S T G L G S K S K P C T K F F S T S G C P F G
Os019399_Os04t0    M E G A G A A R K R S R P D T - - - - A N G G A A G G K R S R - E T E S F Q T G L S S K L K P C T K F F S T I G C P F G
Os006822_Os02t0    M E V G G - - R K R G K P D G - - - - A N G - - A G G K R A R - E S E S F Q T G V G S K S K P C T K F F S T S G C P F G
 
AT3G12130.1     E N C H F L H Y V P G G Y N A V S Q M T N M G P P I - - P Q V S R N M Q G S G N - - - - - - - - - - - - - - - - - - - -
Os019399_Os04t0    E G C H F S H F V P G G Y Q A V A K T L N L G N P A V - P A P A R A P M D H A A G G N S H P A S S G K T R M C T K Y N T
Os006822_Os02t0    E G C H F L H H F P G G Y Q A V A K M T N L G G P A I A P P P G R M P M G N A V - P D G P P T P T V K T R L C N K Y N T
 
AT3G12130.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G G R F S G R - - G E S G P G H V S - - - - - N F
Os019399_Os04t0    A E G C K F G D K C H F A H G E R E L G K P A Y M S H E S A M A P P M G G R Y G G R - - P E P P P P A A M G P P A G N F
Os006822_Os02t0    A E G C K W G D K C H F A H G E R E L G K P M L M - - D S S M P P P M G P R P T G H F A P P P M P S P A M S T P A - S F
 
AT3G12130.1     G D S A T A R F S V D A S L A G A I I G K G G V S S K Q I C R Q T G V K L S I Q D H E R D P N L K N I V L E G T L E Q I
Os019399_Os04t0    G A S A T A K I S V D A S L A G G I I G K G G V N T K Q I C R V T G V K L S I R D H E S D S N L K N I E L E G N F D Q I
Os006822_Os02t0    G A S A T A K I S V D A S L A G G I I G R G G V N T K Q I S R V T G A K L A I R D H E S D T N L K N I E L E G T F D Q I
 
AT3G12130.1     S E A S A M V K D L I G R L N S A - - - - A K K P P G G G L G G - - - - - G G G M G S E G K P H P G - - S N F K T K I C
Os019399_Os04t0    K Q A S N M V G E L I A T I S P S T P - - A K K P A G S A A G A A P A G R G G - - - - - - - - - P G G R S N Y K T K L C
Os006822_Os02t0    K N A S A M V R E L I V S I G G G A P P Q G K K P V G G S H R G - - - - - G G - - - - - - - - - P G - - S N F K T K L C
 
AT3G12130.1     E R F S K G N C T F G D R C H F A H G E A E L R K S G I V
Os019399_Os04t0    E N F V K G T C T F G D R C H F A H G E N E Q R K G A A -
Os006822_Os02t0    E N F T K G S C T F G D R C H F A H G E N E L R K S A A A
 
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