fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030168 not found in 392aa AT3G12130.1 1st_1st 0.420673076 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12130.1     ---------------MD----TRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKP
Sb030168_Sorbi1 GFGALLQPDARARLSMEGAGAARKRSRPE--SANGYAAGGKRSK-DTESFQTGQSSKSKP
                               *:    :***.***  * *. ..* *:** : **:.** .*****

AT3G12130.1     CTKFFSTSGCPFGENCHFLHYVPGGYNAVSQMTNMGPP-IPQVSR---------------
Sb030168_Sorbi1 CTKFFSTIGCPFGEGCHFLHFVPGGYPAVAKMLNLGSPAVSAPSRTHVDHAALTGASHQA
                ******* ******.*****:***** **::* *:*.* :.  **               

AT3G12130.1     --------------------------------------NMQGSGNGGRFSGRGES-----
Sb030168_Sorbi1 SMGKTRMCTKYNTTEGCKFGDKCHFAHSERELGKPAYMSHEGPPMGGRYGGRPEPLQQAS
                                                      . :*.  ***:.** *.     

AT3G12130.1     -GPGHVSNFGDSATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNI
Sb030168_Sorbi1 MGPP-AGNFGASATAKISVDASLAGGIIGKGGVNTKQISRVTGVKLSIRDHESNPSQKNI
                 **  ..*** ****::********.*******.:***.* *******:*** :*. ***

AT3G12130.1     VLEGTLEQISEASAMVKDLIGRL-------NSAAKKPPGGGLGGGGGMGSEGKPHPGSNF
Sb030168_Sorbi1 ELEGNFDQIKQASDMVRDLIATISASMPAKNLSASAAPAGGRGGGLG----GR----SNY
                 ***.::**.:** **:***. :       * :*. .*.** *** *    *:    **:

AT3G12130.1     KTKICERFSKGNCTFGDRCHFAHGEAELRKSGIV
Sb030168_Sorbi1 KTKLCENFVKGACTFGDRCHFAHGETEQRRGAA-
                ***:**.* ** *************:* *:..
BoxShade v3.31 C (beta, 970507) Output
AT3G12130.1     - - - - - - - - - - - - - - - M D - - - - T R K R G R P E A G S F N S N G G G Y K K S K Q E M E S Y S T G L G S K S K P
Sb030168_Sorbi1    G F G A L L Q P D A R A R L S M E G A G A A R K R S R P E - - S A N G Y A A G G K R S K - D T E S F Q T G Q S S K S K P
 
AT3G12130.1     C T K F F S T S G C P F G E N C H F L H Y V P G G Y N A V S Q M T N M G P P - I P Q V S R - - - - - - - - - - - - - - -
Sb030168_Sorbi1    C T K F F S T I G C P F G E G C H F L H F V P G G Y P A V A K M L N L G S P A V S A P S R T H V D H A A L T G A S H Q A
 
AT3G12130.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - N M Q G S G N G G R F S G R G E S - - - - -
Sb030168_Sorbi1    S M G K T R M C T K Y N T T E G C K F G D K C H F A H S E R E L G K P A Y M S H E G P P M G G R Y G G R P E P L Q Q A S
 
AT3G12130.1     - G P G H V S N F G D S A T A R F S V D A S L A G A I I G K G G V S S K Q I C R Q T G V K L S I Q D H E R D P N L K N I
Sb030168_Sorbi1    M G P P - A G N F G A S A T A K I S V D A S L A G G I I G K G G V N T K Q I S R V T G V K L S I R D H E S N P S Q K N I
 
AT3G12130.1     V L E G T L E Q I S E A S A M V K D L I G R L - - - - - - - N S A A K K P P G G G L G G G G G M G S E G K P H P G S N F
Sb030168_Sorbi1    E L E G N F D Q I K Q A S D M V R D L I A T I S A S M P A K N L S A S A A P A G G R G G G L G - - - - G R - - - - S N Y
 
AT3G12130.1     K T K I C E R F S K G N C T F G D R C H F A H G E A E L R K S G I V
Sb030168_Sorbi1    K T K L C E N F V K G A C T F G D R C H F A H G E T E Q R R G A A -
 
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