fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052122 not found in 295aa AT3G12130.1 not_1st 0.444711538 II
Gm007038 not found in 295aa AT3G12130.1 not_1st 0.442307692 II
Gm007039 not found in 225aa AT3G12130.1 not_1st 0.442307692 II
Gm007037 not found in 225aa AT3G12130.1 not_1st 0.439903846 II
Gm004340 not found in 295aa AT3G12130.1 not_1st 0.427884615 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12130.1     MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL
gm004340_Glyma0 MDVRKRGRPD---VNLN-GAVKKTKQELESLSSGVGSKSKPCTKFFSTAGCPFGEGCHFL
gm007037_Glyma0 ------------------------------------------------------------
gm007038_Glyma0 MDIRKRGRPEP-GFSLN-GGFKKSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFL
gm007039_Glyma0 ------------------------------------------------------------
gm052122_Glyma1 MDTRKRGRPEP-GFSLN-GGFKKSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFL
                                                                            

AT3G12130.1     HYVPGGYNAVSQMTNMGPPIP-QVSRNMQ-------------------------------
gm004340_Glyma0 HYVPGGYNVVAHMMNLKPAAP-PP-RTVAAPPPIPNGSAPSAVKTRICNKFNTAEGCKFG
gm007037_Glyma0 ------------MMNLTPAAPPPPSRNVAALPHVPNGSAPSAVKTRICNKFNTAEGCKFG
gm007038_Glyma0 HYVPGGYNAVAHMMNLTPAAPLPPTRNVAALPHVPNGSAPSAVKTRICNKFNTAEGCKFG
gm007039_Glyma0 ------------MMNLTPAAPLPPTRNVAALPHVPNGSAPSAVKTRICNKFNTAEGCKFG
gm052122_Glyma1 HYVPGGYNAVAHMMNLTPAAP-PASRNVAALPPVPNGSAPPAVKTRICNKFNTAEGCKFG
                            * *: *. *    *.:                                

AT3G12130.1     -----------------------------GSGNGGRFSGRGESGPGHVSNFGDSATARFS
gm004340_Glyma0 DKCHFAHGEWELGKPIAPSIDDHHHHRPLGPPAGGRMAGRIEPPPAMAGSFGAISTAKIS
gm007037_Glyma0 DKCHFAHGEWELGKHIAPSFDD---HHAMGPPGAGRLAGRME-PPGPAASFGANSTAKIS
gm007038_Glyma0 DKCHFAHGEWELGKHIAPSFDD---HRAMGPPGAGRLAGRME-PPGPAASFGANSTAKIS
gm007039_Glyma0 DKCHFAHGEWELGKHIAPSFDD---HRAMGPPGAGRLAGRME-PPGPAASFGANSTAKIS
gm052122_Glyma1 DKCHFAHGEWELGKHIAPSFDD---HRTMGPTGVGRLAGRMEPPPGPAASFGANATAKIS
                                             *.   **::** *  *. ...**  :**::*

AT3G12130.1     VDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKD
gm004340_Glyma0 VEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGTFEQIKEASNMVKD
gm007037_Glyma0 VEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFEQIKEASNMVKD
gm007038_Glyma0 VEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFEQIKEASNMVKD
gm007039_Glyma0 VEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFEQIKEASNMVKD
gm052122_Glyma1 VEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFEQIKEASNMVKD
                *:*************.*********.****::** ****:** ***::***.*** ****

AT3G12130.1     LIGRLNSAAKKPPGGGLGGGGGMGSEGKPHPGSNFKTKICERFSKGNCTFGDRCHFAHGE
gm004340_Glyma0 LLLTVSMSA--PPKSTPGVPGAPAP-----PGSNFKTKLCENFAKGSCTFGERCHFAHGA
gm007037_Glyma0 LLLTLQMSA--PPKTTPGVPGAPAS-----HGSNFKTKLCENFAKGSCTFGDRCHFAHGA
gm007038_Glyma0 LLLTLQMSA--PPKTTPGVPGAPAS-----HGSNFKTKLCENFAKGSCTFGDRCHFAHGA
gm007039_Glyma0 LLLTLQMSA--PPKTTPGVPGAPAS-----HGSNFKTKLCENFAKGSCTFGDRCHFAHGA
gm052122_Glyma1 LLLTLQMSA--PPKTTPGVPGAPAS-----HGSNFKTKLCENFTKGSCTFGDRCHFAHGA
                *:  :. :*  **    *  *. ..      *******:**.*:**.****:******* 

AT3G12130.1     AELRKSGIV
gm004340_Glyma0 AELRKSGV-
gm007037_Glyma0 SELRKSGV-
gm007038_Glyma0 SELRKSGV-
gm007039_Glyma0 SELRKSGV-
gm052122_Glyma1 AELRKSGV-
                :******:
BoxShade v3.31 C (beta, 970507) Output
AT3G12130.1     M D T R K R G R P E A G S F N S N G G G Y K K S K Q E M E S Y S T G L G S K S K P C T K F F S T S G C P F G E N C H F L
gm004340_Glyma0    M D V R K R G R P D - - - V N L N - G A V K K T K Q E L E S L S S G V G S K S K P C T K F F S T A G C P F G E G C H F L
gm007037_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm007038_Glyma0    M D I R K R G R P E P - G F S L N - G G F K K S K Q E M E S L S T G V G S K S K P C T K F F S T A G C P F G E G C H F L
gm007039_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm052122_Glyma1    M D T R K R G R P E P - G F S L N - G G F K K S K Q E M E S L S T G V G S K S K P C T K F F S T A G C P F G E G C H F L
 
AT3G12130.1     H Y V P G G Y N A V S Q M T N M G P P I P - Q V S R N M Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm004340_Glyma0    H Y V P G G Y N V V A H M M N L K P A A P - P P - R T V A A P P P I P N G S A P S A V K T R I C N K F N T A E G C K F G
gm007037_Glyma0    - - - - - - - - - - - - M M N L T P A A P P P P S R N V A A L P H V P N G S A P S A V K T R I C N K F N T A E G C K F G
gm007038_Glyma0    H Y V P G G Y N A V A H M M N L T P A A P L P P T R N V A A L P H V P N G S A P S A V K T R I C N K F N T A E G C K F G
gm007039_Glyma0    - - - - - - - - - - - - M M N L T P A A P L P P T R N V A A L P H V P N G S A P S A V K T R I C N K F N T A E G C K F G
gm052122_Glyma1    H Y V P G G Y N A V A H M M N L T P A A P - P A S R N V A A L P P V P N G S A P P A V K T R I C N K F N T A E G C K F G
 
AT3G12130.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G S G N G G R F S G R G E S G P G H V S N F G D S A T A R F S
gm004340_Glyma0    D K C H F A H G E W E L G K P I A P S I D D H H H H R P L G P P A G G R M A G R I E P P P A M A G S F G A I S T A K I S
gm007037_Glyma0    D K C H F A H G E W E L G K H I A P S F D D - - - H H A M G P P G A G R L A G R M E - P P G P A A S F G A N S T A K I S
gm007038_Glyma0    D K C H F A H G E W E L G K H I A P S F D D - - - H R A M G P P G A G R L A G R M E - P P G P A A S F G A N S T A K I S
gm007039_Glyma0    D K C H F A H G E W E L G K H I A P S F D D - - - H R A M G P P G A G R L A G R M E - P P G P A A S F G A N S T A K I S
gm052122_Glyma1    D K C H F A H G E W E L G K H I A P S F D D - - - H R T M G P T G V G R L A G R M E P P P G P A A S F G A N A T A K I S
 
AT3G12130.1     V D A S L A G A I I G K G G V S S K Q I C R Q T G V K L S I Q D H E R D P N L K N I V L E G T L E Q I S E A S A M V K D
gm004340_Glyma0    V E A S L A G A I I G K G G V N S K Q I C R Q T G A K L S I R E H E S D P N L R N I E L E G T F E Q I K E A S N M V K D
gm007037_Glyma0    V E A S L A G A I I G K G G V N S K Q I C R Q T G A K L S I R E H E S D P N L R N I E L E G S F E Q I K E A S N M V K D
gm007038_Glyma0    V E A S L A G A I I G K G G V N S K Q I C R Q T G A K L S I R E H E S D P N L R N I E L E G S F E Q I K E A S N M V K D
gm007039_Glyma0    V E A S L A G A I I G K G G V N S K Q I C R Q T G A K L S I R E H E S D P N L R N I E L E G S F E Q I K E A S N M V K D
gm052122_Glyma1    V E A S L A G A I I G K G G V N S K Q I C R Q T G A K L S I R E H E S D P N L R N I E L E G S F E Q I K E A S N M V K D
 
AT3G12130.1     L I G R L N S A A K K P P G G G L G G G G G M G S E G K P H P G S N F K T K I C E R F S K G N C T F G D R C H F A H G E
gm004340_Glyma0    L L L T V S M S A - - P P K S T P G V P G A P A P - - - - - P G S N F K T K L C E N F A K G S C T F G E R C H F A H G A
gm007037_Glyma0    L L L T L Q M S A - - P P K T T P G V P G A P A S - - - - - H G S N F K T K L C E N F A K G S C T F G D R C H F A H G A
gm007038_Glyma0    L L L T L Q M S A - - P P K T T P G V P G A P A S - - - - - H G S N F K T K L C E N F A K G S C T F G D R C H F A H G A
gm007039_Glyma0    L L L T L Q M S A - - P P K T T P G V P G A P A S - - - - - H G S N F K T K L C E N F A K G S C T F G D R C H F A H G A
gm052122_Glyma1    L L L T L Q M S A - - P P K T T P G V P G A P A S - - - - - H G S N F K T K L C E N F T K G S C T F G D R C H F A H G A
 
AT3G12130.1     A E L R K S G I V
gm004340_Glyma0    A E L R K S G V -
gm007037_Glyma0    S E L R K S G V -
gm007038_Glyma0    S E L R K S G V -
gm007039_Glyma0    S E L R K S G V -
gm052122_Glyma1    A E L R K S G V -
 
0