fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12130.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm007036 not found in 295aa AT5G06770.1 not_not 0.439903846 III
Gm029283 not found in 297aa AT5G06770.1 not_not 0.423076923 III
Gm055758 not found in 297aa AT5G06770.1 not_not 0.420673076 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12130.1     MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL
gm055758_Glyma2 MD-RKRGRPEAA-FNFN-GGAKKSRPETDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFL
gm029283_Glyma1 MD-RKRGRHEAA-FNFN-GGAKKSRPEMDSFPTGLGSKSKPCTKFFSTSGCPFGEGCHFL
gm007036_Glyma0 MDIRKRGRHETG-FSLN-GGFKRSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFL
                ** ***** *:. *. * ** *:*: * :* .**:*************:******.****

AT3G12130.1     HYVPGGYNAVSQMTNM--GPPIPQVSRN--------------------------------
gm055758_Glyma2 HYVPGGFKAVSQLINVGSNPVTPQVGRNPVP-------PSFPDGSSPPVVKTRLCNKFNT
gm029283_Glyma1 HYVPGGFKAVSQLINVGSNPVIPQVGRNPVP-------PSFPDGSSPPVVKTRLCNKFNT
gm007036_Glyma0 HYVPGGYNAVAHMMNL--TPAAP-----PPPSRNVAALPHVPNGSAPSAVKTRICNKFNT
                ******::**::: *:   *  *                                     

AT3G12130.1     -------------------------------MQGSGNGGRFSGRGE-SGPGH--VSNFGD
gm055758_Glyma2 AEGCKFGDKCHFAHGEWELGRPTAPSYEDPRVLGQMPSSRVGGRVEPPHPAHGAAASFGA
gm029283_Glyma1 AEGCKFGDKCHFAHGEWELGRPTAPSYEDPRVMGQMPSSRVGGRVEPPHPAHGAAASFGA
gm007036_Glyma0 AEGCKFGDKCHFAHGEWELGKHIAPSFDDHHAMGPPGAGRLAGRMEPPGP----AASFGA
                                                 *   ..*..** * . *    .:.** 

AT3G12130.1     SATARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISE
gm055758_Glyma2 SATAKISINASLAGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELEGSFDQIKQ
gm029283_Glyma1 SATAKISINASLAGAVIGKNGVNSKQICRVTGAKLSIRDHDTDPNLRNIELEGSFDQIKQ
gm007036_Glyma0 NSTAKISVEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFEQIKE
                .:**::*::******:***.**.****** **.****::*: ****:** ***:::**.:

AT3G12130.1     ASAMVKDLIGRLNSAAKKPPGGGLGGGGGMGSEGKPH-PGSNFKTKICERFSKGNCTFGD
gm055758_Glyma2 ASAMVHEVILNVSSASGPPM------KSFTSQTSAPT---SNFKTKLCENFAKGSCTFGE
gm029283_Glyma1 ASAMVHEVILNVSSASGPPM------KSFTSQNSAPA---SNFKTKLCENFAKGSCTFGE
gm007036_Glyma0 ASNMVKDLLLTL-QMSAPP-------KTTPGVPGAPASHGSNFKTKLCENFAKGSCTFGD
                ** **::::  : . :  *           .  . *    ******:**.*:**.****:

AT3G12130.1     RCHFAHGEAELRKSGIV
gm055758_Glyma2 RCHFAHGTDELRKSGM-
gm029283_Glyma1 RCHFAHGNDELRKSGM-
gm007036_Glyma0 RCHFAHGASELRKSGV-
                *******  ******:
BoxShade v3.31 C (beta, 970507) Output
AT3G12130.1     M D T R K R G R P E A G S F N S N G G G Y K K S K Q E M E S Y S T G L G S K S K P C T K F F S T S G C P F G E N C H F L
gm055758_Glyma2    M D - R K R G R P E A A - F N F N - G G A K K S R P E T D S F P T G L G S K S K P C T K F F S T S G C P F G E G C H F L
gm029283_Glyma1    M D - R K R G R H E A A - F N F N - G G A K K S R P E M D S F P T G L G S K S K P C T K F F S T S G C P F G E G C H F L
gm007036_Glyma0    M D I R K R G R H E T G - F S L N - G G F K R S K Q E M E S L S T G V G S K S K P C T K F F S T A G C P F G E G C H F L
 
AT3G12130.1     H Y V P G G Y N A V S Q M T N M - - G P P I P Q V S R N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm055758_Glyma2    H Y V P G G F K A V S Q L I N V G S N P V T P Q V G R N P V P - - - - - - - P S F P D G S S P P V V K T R L C N K F N T
gm029283_Glyma1    H Y V P G G F K A V S Q L I N V G S N P V I P Q V G R N P V P - - - - - - - P S F P D G S S P P V V K T R L C N K F N T
gm007036_Glyma0    H Y V P G G Y N A V A H M M N L - - T P A A P - - - - - P P P S R N V A A L P H V P N G S A P S A V K T R I C N K F N T
 
AT3G12130.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M Q G S G N G G R F S G R G E - S G P G H - - V S N F G D
gm055758_Glyma2    A E G C K F G D K C H F A H G E W E L G R P T A P S Y E D P R V L G Q M P S S R V G G R V E P P H P A H G A A A S F G A
gm029283_Glyma1    A E G C K F G D K C H F A H G E W E L G R P T A P S Y E D P R V M G Q M P S S R V G G R V E P P H P A H G A A A S F G A
gm007036_Glyma0    A E G C K F G D K C H F A H G E W E L G K H I A P S F D D H H A M G P P G A G R L A G R M E P P G P - - - - A A S F G A
 
AT3G12130.1     S A T A R F S V D A S L A G A I I G K G G V S S K Q I C R Q T G V K L S I Q D H E R D P N L K N I V L E G T L E Q I S E
gm055758_Glyma2    S A T A K I S I N A S L A G A V I G K N G V N S K Q I C R V T G A K L S I R D H D T D P N L R N I E L E G S F D Q I K Q
gm029283_Glyma1    S A T A K I S I N A S L A G A V I G K N G V N S K Q I C R V T G A K L S I R D H D T D P N L R N I E L E G S F D Q I K Q
gm007036_Glyma0    N S T A K I S V E A S L A G A I I G K G G V N S K Q I C R Q T G A K L S I R E H E S D P N L R N I E L E G S F E Q I K E
 
AT3G12130.1     A S A M V K D L I G R L N S A A K K P P G G G L G G G G G M G S E G K P H - P G S N F K T K I C E R F S K G N C T F G D
gm055758_Glyma2    A S A M V H E V I L N V S S A S G P P M - - - - - - K S F T S Q T S A P T - - - S N F K T K L C E N F A K G S C T F G E
gm029283_Glyma1    A S A M V H E V I L N V S S A S G P P M - - - - - - K S F T S Q N S A P A - - - S N F K T K L C E N F A K G S C T F G E
gm007036_Glyma0    A S N M V K D L L L T L - Q M S A P P - - - - - - - K T T P G V P G A P A S H G S N F K T K L C E N F A K G S C T F G D
 
AT3G12130.1     R C H F A H G E A E L R K S G I V
gm055758_Glyma2    R C H F A H G T D E L R K S G M -
gm029283_Glyma1    R C H F A H G N D E L R K S G M -
gm007036_Glyma0    R C H F A H G A S E L R K S G V -
 
0