fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp007082 not found in 343aa AT5G06950.4 1st_not 0.600806451 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12250.1     MAD--TSSRTDVSTDGDTDHRDLGSDRGHMHAAASDSSDRSKD----KLDQKTLRRLAQN
pp007082_Pp1s25 MGDNSASARTDSSSDMDGDAKL--DDGQHLASGGGNSNDSSLETGTKNGDSKVLRRLAQN
                *.*  :*:*** *:* * * :   .*  *: :...:*.* * :    : *.*.*******

AT3G12250.1     REAARKSRLRKKAYVQQLENSRLKLTQLEQELQRAR-QQGVFI--SSSGDQAHSTGG---
pp007082_Pp1s25 REAARKSRLRKKAYVQQLESSRIKLNQLEQELQRTRQQQGLYLGPGSYSDQNGQSGGVGG
                *******************.**:**.********:* ***:::  .* .**  .:**   

AT3G12250.1     -----NGALAFDAEHSRWLEEKNRQMNELRSALNAHAGDTELRIIVDGVMAHYEELFRIK
pp007082_Pp1s25 ANAYSSGAAAFDLEYARWVEDHTRQMSELRVALQAHVADADLRLLVDGSMAHYDDLFRLK
                     .** *** *::**:*::.***.*** **:**..*::**::*** ****::***:*

AT3G12250.1     SNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQVMGINSLQQT
pp007082_Pp1s25 DAAAKADVFHLVSGMWKTPAERCFVWIGGCRPSELLKILVPQIEPLTEQQLLNICNLQQS
                . *** *****:************:*:** *.*****:*. *:**:**:*::.* .***:

AT3G12250.1     SQQAEDALSQGMESLQQSLADTLSSGTLGSSSSDNVASYMGQMAMAMGQLGTLEGFIRQA
pp007082_Pp1s25 SQQGEEALSQGMEQLQQSLAETLSAGSLGSAA--NVANYMGQMAVAMGQLGNLEGFVRQA
                ***.*:*******.******:***:*:***::  ***.******:******.****:***

AT3G12250.1     DNLRLQTLQQMLRVLTTRQSARALLAIHDYSSRLRALSSLWLARPRE
pp007082_Pp1s25 DHLRQQTLQQMHRVLTIRQVARGLLAMGDYFARLRALSSLWSARPRE
                *:** ****** **** ** **.***: ** :********* *****
BoxShade v3.31 C (beta, 970507) Output
AT3G12250.1     M A D - - T S S R T D V S T D G D T D H R D L G S D R G H M H A A A S D S S D R S K D - - - - K L D Q K T L R R L A Q N
pp007082_Pp1s25    M G D N S A S A R T D S S S D M D G D A K L - - D D G Q H L A S G G G N S N D S S L E T G T K N G D S K V L R R L A Q N
 
AT3G12250.1     R E A A R K S R L R K K A Y V Q Q L E N S R L K L T Q L E Q E L Q R A R - Q Q G V F I - - S S S G D Q A H S T G G - - -
pp007082_Pp1s25    R E A A R K S R L R K K A Y V Q Q L E S S R I K L N Q L E Q E L Q R T R Q Q Q G L Y L G P G S Y S D Q N G Q S G G V G G
 
AT3G12250.1     - - - - - N G A L A F D A E H S R W L E E K N R Q M N E L R S A L N A H A G D T E L R I I V D G V M A H Y E E L F R I K
pp007082_Pp1s25    A N A Y S S G A A A F D L E Y A R W V E D H T R Q M S E L R V A L Q A H V A D A D L R L L V D G S M A H Y D D L F R L K
 
AT3G12250.1     S N A A K N D V F H L L S G M W K T P A E R C F L W L G G F R S S E L L K L L A N Q L E P M T E R Q V M G I N S L Q Q T
pp007082_Pp1s25    D A A A K A D V F H L V S G M W K T P A E R C F V W I G G C R P S E L L K I L V P Q I E P L T E Q Q L L N I C N L Q Q S
 
AT3G12250.1     S Q Q A E D A L S Q G M E S L Q Q S L A D T L S S G T L G S S S S D N V A S Y M G Q M A M A M G Q L G T L E G F I R Q A
pp007082_Pp1s25    S Q Q G E E A L S Q G M E Q L Q Q S L A E T L S A G S L G S A A - - N V A N Y M G Q M A V A M G Q L G N L E G F V R Q A
 
AT3G12250.1     D N L R L Q T L Q Q M L R V L T T R Q S A R A L L A I H D Y S S R L R A L S S L W L A R P R E
pp007082_Pp1s25    D H L R Q Q T L Q Q M H R V L T I R Q V A R G L L A M G D Y F A R L R A L S S L W S A R P R E
 
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