fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm036516 not found in 469aa AT3G12250.2 1st_not 0.814516129 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12250.1     ------------------------------------------------------------
gm036516_Glyma1 MGSRTTWRVVGVEDDKGAERGMPSFNSELPNSNSCYTEGNTIDSFRVSDFGAFDQSYHIE
                                                                            

AT3G12250.1     ------------------------------------------------------------
gm036516_Glyma1 DAVDLSGNPVYNSLKVNSQTISPGSVHISSLGQLPISLEKSPLTNQTEPPHRLRLQKVQS
                                                                            

AT3G12250.1     ------------------MADTSSRTDVSTDGDTDHRDLGSDRGHMHAAASDSSDRSKDK
gm036516_Glyma1 SNPGTILVGNTDNWEESTMADASPRTDISTDGDTDDKNHPFDRNQALTAVSDSSDRSKDK
                                  ***:*.***:*******.::   **.:  :*.**********

AT3G12250.1     LDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQELQRARQQGVFISSSGDQ
gm036516_Glyma1 SDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQ
                 ******************************.*******************:********

AT3G12250.1     AHSTGGNGALAFDAEHSRWLEEKNRQMNELRSALNAHAGDTELRIIVDGVMAHYEELFRI
gm036516_Glyma1 AHTLSGNGAMQFDAEYARWLEEQNRQINELRAAVNSHASDTELRMIVDGILAHYDEIFRL
                **: .****: ****::*****:***:****:*:*:**.*****:****::***:*:**:

AT3G12250.1     KSNAAKNDVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLANQLEPMTERQVMGINSLQQ
gm036516_Glyma1 KGVAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVSQLEPLTEQQLMGITNLQQ
                *. *** *********************************..****:**:*:***..***

AT3G12250.1     TSQQAEDALSQGMESLQQSLADTLSSGTLGSS-SSDNVASYMGQMAMAMGQLGTLEGFIR
gm036516_Glyma1 SSQQAEDALSQGMEALQQSLAETLSTGAPASSGSSGNVASYMGQMAMAMGKLGTLEGFIQ
                :*************:******:***:*: .** **.**************:********:

AT3G12250.1     QADNLRLQTLQQMLRVLTTRQSARALLAIHDYSSRLRALSSLWLARPRE
gm036516_Glyma1 QADNLRQQTLQQMHRILTTRQSARALLAIHDYISRLRALSSLWLARPRD
                ****** ****** *:**************** ***************:
BoxShade v3.31 C (beta, 970507) Output
AT3G12250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm036516_Glyma1    M G S R T T W R V V G V E D D K G A E R G M P S F N S E L P N S N S C Y T E G N T I D S F R V S D F G A F D Q S Y H I E
 
AT3G12250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm036516_Glyma1    D A V D L S G N P V Y N S L K V N S Q T I S P G S V H I S S L G Q L P I S L E K S P L T N Q T E P P H R L R L Q K V Q S
 
AT3G12250.1     - - - - - - - - - - - - - - - - - - M A D T S S R T D V S T D G D T D H R D L G S D R G H M H A A A S D S S D R S K D K
gm036516_Glyma1    S N P G T I L V G N T D N W E E S T M A D A S P R T D I S T D G D T D D K N H P F D R N Q A L T A V S D S S D R S K D K
 
AT3G12250.1     L D Q K T L R R L A Q N R E A A R K S R L R K K A Y V Q Q L E N S R L K L T Q L E Q E L Q R A R Q Q G V F I S S S G D Q
gm036516_Glyma1    S D Q K T L R R L A Q N R E A A R K S R L R K K A Y V Q Q L E S S R L K L T Q L E Q E L Q R A R Q Q G I F I S S S G D Q
 
AT3G12250.1     A H S T G G N G A L A F D A E H S R W L E E K N R Q M N E L R S A L N A H A G D T E L R I I V D G V M A H Y E E L F R I
gm036516_Glyma1    A H T L S G N G A M Q F D A E Y A R W L E E Q N R Q I N E L R A A V N S H A S D T E L R M I V D G I L A H Y D E I F R L
 
AT3G12250.1     K S N A A K N D V F H L L S G M W K T P A E R C F L W L G G F R S S E L L K L L A N Q L E P M T E R Q V M G I N S L Q Q
gm036516_Glyma1    K G V A A K A D V F H L L S G M W K T P A E R C F L W L G G F R S S E L L K L L V S Q L E P L T E Q Q L M G I T N L Q Q
 
AT3G12250.1     T S Q Q A E D A L S Q G M E S L Q Q S L A D T L S S G T L G S S - S S D N V A S Y M G Q M A M A M G Q L G T L E G F I R
gm036516_Glyma1    S S Q Q A E D A L S Q G M E A L Q Q S L A E T L S T G A P A S S G S S G N V A S Y M G Q M A M A M G K L G T L E G F I Q
 
AT3G12250.1     Q A D N L R L Q T L Q Q M L R V L T T R Q S A R A L L A I H D Y S S R L R A L S S L W L A R P R E
gm036516_Glyma1    Q A D N L R Q Q T L Q Q M H R I L T T R Q S A R A L L A I H D Y I S R L R A L S S L W L A R P R D
 
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