fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016746 not found in 292aa AT3G12480.1 1st_1st 0.476673427 Ia
Pt011327 not found in 302aa AT3G12480.1 1st_1st 0.466531440 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12480.1     MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAK
gm016746_Glyma0 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEVTLQRGAK
pt011327_POPTR_ MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTHEITLQRGAK
                *:***********************************:************:*:**:****

AT3G12480.1     TVSSLHLKHCVERYNVFDFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDEVN
gm016746_Glyma0 TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHGHGHSEAGADDRALPKRRKAVGDDGN
pt011327_POPTR_ TMSALHLKHCVQSYNVFDFLREIVSRVPDY----SHGHSDSTGDHRPL-QKRKPTGDECN
                *:.:*******: *.******::**:****    .:**.:   *.*.: ::**. .*: *

AT3G12480.1     DSDEEYKKSKTQEIGSAKTSGRGGRGRGRGRGRGGRAAKAAEREGLNREMEVEAANSGQP
gm016746_Glyma0 DSDEEAKRSKMRELGHTGTPGR-GRGRGRGRGR-GRGARTIERDICHQQVESEPCTSILQ
pt011327_POPTR_ DSDEELKRSRMHEMSHAGSSGR-GRGRGRGRGR-GRGARNIERESSSRDLEPESCTTVQQ
                ***** *:*: :*:. : :.** ********** **.*:  **:   :::* *...:   

AT3G12480.1     PPEDNVKMHASESSPQEDEKKGIDGTAASNEDTKQHL----QSPKEGIDFDLNAESLDLN
gm016746_Glyma0 SSNDIPNTSVP-----------IDNGPQSKELPKENFVISEESTQSFRNIDLNAN-LNEN
pt011327_POPTR_ SIKNNTNPGVV-----------MDNGSESKESVKENNRVSDATNQPERNFDLNAE-VNDS
                . ::  :  .            :*. . *:*  *::      : :   ::****: :: .

AT3G12480.1     ETKLA--------PA----TGTTTTTTAA----------TDSEEYSGWPMMDISKM--DP
gm016746_Glyma0 EDKNAGTAVPASLPE---------------PTSMDTAMEIKHEEIPGWSLSDVDKMGIDT
pt011327_POPTR_ EDAKAAAAPAAAAPAAAATTTTTTTTTSAPSSSVEPAAETNHEEYPGWSLSEMDKMVIDP
                *   *        *                          . ** .**.: ::.**  *.

AT3G12480.1     AQLASLGKRIDEDEEDYDEEG
gm016746_Glyma0 MQLANLGSRLEEDEEDYDEEG
pt011327_POPTR_ LQLAQLSKRLDEEEEDYDEEG
                 ***.*..*::*:********
BoxShade v3.31 C (beta, 970507) Output
AT3G12480.1     M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K S L E L F L Q D L C D R T Y E I T L E R G A K
gm016746_Glyma0    M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K A L E L F L Q D L C D R T Y E V T L Q R G A K
pt011327_POPTR_    M K K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K A L E L F L Q D L C D R T H E I T L Q R G A K
 
AT3G12480.1     T V S S L H L K H C V E R Y N V F D F L R E V V S K V P D Y G H S Q G Q G H G D V T M D D R S I S K R R K P I S D E V N
gm016746_Glyma0    T M N S L H L K H C V Q S Y S V F D F L R D I V S R V P D Y G H G H G H G H S E A G A D D R A L P K R R K A V G D D G N
pt011327_POPTR_    T M S A L H L K H C V Q S Y N V F D F L R E I V S R V P D Y - - - - S H G H S D S T G D H R P L - Q K R K P T G D E C N
 
AT3G12480.1     D S D E E Y K K S K T Q E I G S A K T S G R G G R G R G R G R G R G G R A A K A A E R E G L N R E M E V E A A N S G Q P
gm016746_Glyma0    D S D E E A K R S K M R E L G H T G T P G R - G R G R G R G R G R - G R G A R T I E R D I C H Q Q V E S E P C T S I L Q
pt011327_POPTR_    D S D E E L K R S R M H E M S H A G S S G R - G R G R G R G R G R - G R G A R N I E R E S S S R D L E P E S C T T V Q Q
 
AT3G12480.1     P P E D N V K M H A S E S S P Q E D E K K G I D G T A A S N E D T K Q H L - - - - Q S P K E G I D F D L N A E S L D L N
gm016746_Glyma0    S S N D I P N T S V P - - - - - - - - - - - I D N G P Q S K E L P K E N F V I S E E S T Q S F R N I D L N A N - L N E N
pt011327_POPTR_    S I K N N T N P G V V - - - - - - - - - - - M D N G S E S K E S V K E N N R V S D A T N Q P E R N F D L N A E - V N D S
 
AT3G12480.1     E T K L A - - - - - - - - P A - - - - T G T T T T T T A A - - - - - - - - - - T D S E E Y S G W P M M D I S K M - - D P
gm016746_Glyma0    E D K N A G T A V P A S L P E - - - - - - - - - - - - - - - P T S M D T A M E I K H E E I P G W S L S D V D K M G I D T
pt011327_POPTR_    E D A K A A A A P A A A A P A A A A T T T T T T T T T S A P S S S V E P A A E T N H E E Y P G W S L S E M D K M V I D P
 
AT3G12480.1     A Q L A S L G K R I D E D E E D Y D E E G
gm016746_Glyma0    M Q L A N L G S R L E E D E E D Y D E E G
pt011327_POPTR_    L Q L A Q L S K R L D E E E E D Y D E E G
 
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