fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp028327 not found in 326aa AT3G12480.1 1st_1st 0.338742393 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12480.1     MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAK
pp028327_Pp1s11 MKKKLDTRFPAARIKKIMQADEEVGKIAMATPVLISKALELFLQNLCDKTYEITLRRGAK
                *:********************:*****:*.***:**:******:***:******.****

AT3G12480.1     TVSSLHLKHCVERYNVFDFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDEVN
pp028327_Pp1s11 TMSSFHLKQCVQTNSVFDFLQEIVSKVPDIG-------TETTCDERNGGRRRK--QSDGD
                *:**:***:**:  .*****:*:****** *        :.* *:*. .:***  ..: :

AT3G12480.1     DSDEE--YKKSKTQEIGSAKTSGRG-----GRGRGRGRGRGGRAAKAAEREGLNREMEVE
pp028327_Pp1s11 DSDEEEVVKRPKSED---QSTSGRGRGRGRGRGRGRGRGRGSNGTPSSRSNGVEKAEDSE
                *****   *:.*:::    .*****     ***********...: ::. :*:::  : *

AT3G12480.1     AA--NSGQPPPE-DNVKMH--ASESSPQEDEKKGIDGTAASNEDTKQHLQSPKEGIDFDL
pp028327_Pp1s11 DAEMDTYSPSPDRENVILDPIVHKPRPKSEEAAARDASPTSSGHTK----SPKL-LGFDL
                 *  :: .*.*: :** :.  . :. *:.:*  . *.:.:*. .**    ***  :.***

AT3G12480.1     NAESLDLNETKLAPATGTTTTTTAATDSEEYSGWPMMDISKMDPA---------QLASLG
pp028327_Pp1s11 N---MDLDENGEVAAGADEATVNEEEVEHDGSNVPTQDLD-VDSENVLGGTLHLQRSELR
                *   :**:*.  ..* .  :*..    ..: *. *  *:. :*.          * :.* 

AT3G12480.1     KRIDEDEEDY---DEEG------------------------------
pp028327_Pp1s11 PSLHPDEDDYDCEDEDGDDWTLWCLWSAKDGVAIFCFEMKKGAPLIF
                  :. **:**   **:*
BoxShade v3.31 C (beta, 970507) Output
AT3G12480.1     M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K S L E L F L Q D L C D R T Y E I T L E R G A K
pp028327_Pp1s11    M K K K L D T R F P A A R I K K I M Q A D E E V G K I A M A T P V L I S K A L E L F L Q N L C D K T Y E I T L R R G A K
 
AT3G12480.1     T V S S L H L K H C V E R Y N V F D F L R E V V S K V P D Y G H S Q G Q G H G D V T M D D R S I S K R R K P I S D E V N
pp028327_Pp1s11    T M S S F H L K Q C V Q T N S V F D F L Q E I V S K V P D I G - - - - - - - T E T T C D E R N G G R R R K - - Q S D G D
 
AT3G12480.1     D S D E E - - Y K K S K T Q E I G S A K T S G R G - - - - - G R G R G R G R G R G G R A A K A A E R E G L N R E M E V E
pp028327_Pp1s11    D S D E E E V V K R P K S E D - - - Q S T S G R G R G R G R G R G R G R G R G R G S N G T P S S R S N G V E K A E D S E
 
AT3G12480.1     A A - - N S G Q P P P E - D N V K M H - - A S E S S P Q E D E K K G I D G T A A S N E D T K Q H L Q S P K E G I D F D L
pp028327_Pp1s11    D A E M D T Y S P S P D R E N V I L D P I V H K P R P K S E E A A A R D A S P T S S G H T K - - - - S P K L - L G F D L
 
AT3G12480.1     N A E S L D L N E T K L A P A T G T T T T T T A A T D S E E Y S G W P M M D I S K M D P A - - - - - - - - - Q L A S L G
pp028327_Pp1s11    N - - - M D L D E N G E V A A G A D E A T V N E E E V E H D G S N V P T Q D L D - V D S E N V L G G T L H L Q R S E L R
 
AT3G12480.1     K R I D E D E E D Y - - - D E E G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp028327_Pp1s11    P S L H P D E D D Y D C E D E D G D D W T L W C L W S A K D G V A I F C F E M K K G A P L I F
 
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