fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011327 not found in 302aa AT3G12480.1 1st_1st 0.466531440 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12480.1     MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAK
pt011327_POPTR_ MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTHEITLQRGAK
                *:***********************************:************:****:****

AT3G12480.1     TVSSLHLKHCVERYNVFDFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDEVN
pt011327_POPTR_ TMSALHLKHCVQSYNVFDFLREIVSRVPDYSH----GHSDSTGDHRPLQK-RKPTGDECN
                *:*:*******: *********:**:****.*    **.* * *.*.:.* *** .** *

AT3G12480.1     DSDEEYKKSKTQEIGSAKTSGRGGRGRGRGRGRGGRAAKAAEREGLNREMEVEAANSGQP
pt011327_POPTR_ DSDEELKRSRMHEMSHAGSSGR-GRGRGRGRGR-GRGARNIERESSSRDLEPESCTTVQQ
                ***** *:*: :*:. * :*** ********** **.*:  ***. .*::* *:..: * 

AT3G12480.1     PPEDN-----VKMHASESSPQEDEKKGIDGTAASNEDTKQHLQSPKEGIDFDLNAESLDL
pt011327_POPTR_ SIKNNTNPGVVMDNGSES--KESVKENNRVSDATNQPER----------NFDLNAEVNDS
                . ::*     *  :.***  :*. *:.   : *:*:  :          :******  * 

AT3G12480.1     NETKLAPA-----------TGTTTTTTAA----------TDSEEYSGWPMMDISKM--DP
pt011327_POPTR_ EDAKAAAAPAAAAPAAAATTTTTTTTTSAPSSSVEPAAETNHEEYPGWSLSEMDKMVIDP
                :::* *.*           * ******:*          *: ***.**.: ::.**  **

AT3G12480.1     AQLASLGKRIDEDEEDYDEEG
pt011327_POPTR_ LQLAQLSKRLDEEEEDYDEEG
                 ***.*.**:**:********
BoxShade v3.31 C (beta, 970507) Output
AT3G12480.1     M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K S L E L F L Q D L C D R T Y E I T L E R G A K
pt011327_POPTR_    M K K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K A L E L F L Q D L C D R T H E I T L Q R G A K
 
AT3G12480.1     T V S S L H L K H C V E R Y N V F D F L R E V V S K V P D Y G H S Q G Q G H G D V T M D D R S I S K R R K P I S D E V N
pt011327_POPTR_    T M S A L H L K H C V Q S Y N V F D F L R E I V S R V P D Y S H - - - - G H S D S T G D H R P L Q K - R K P T G D E C N
 
AT3G12480.1     D S D E E Y K K S K T Q E I G S A K T S G R G G R G R G R G R G R G G R A A K A A E R E G L N R E M E V E A A N S G Q P
pt011327_POPTR_    D S D E E L K R S R M H E M S H A G S S G R - G R G R G R G R G R - G R G A R N I E R E S S S R D L E P E S C T T V Q Q
 
AT3G12480.1     P P E D N - - - - - V K M H A S E S S P Q E D E K K G I D G T A A S N E D T K Q H L Q S P K E G I D F D L N A E S L D L
pt011327_POPTR_    S I K N N T N P G V V M D N G S E S - - K E S V K E N N R V S D A T N Q P E R - - - - - - - - - - N F D L N A E V N D S
 
AT3G12480.1     N E T K L A P A - - - - - - - - - - - T G T T T T T T A A - - - - - - - - - - T D S E E Y S G W P M M D I S K M - - D P
pt011327_POPTR_    E D A K A A A A P A A A A P A A A A T T T T T T T T T S A P S S S V E P A A E T N H E E Y P G W S L S E M D K M V I D P
 
AT3G12480.1     A Q L A S L G K R I D E D E E D Y D E E G
pt011327_POPTR_    L Q L A Q L S K R L D E E E E D Y D E E G
 
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