fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt011327 not found in 302aa AT3G12480.1 1st_1st 0.466531440 Ia
Pt032295 not found in 310aa AT3G12480.1 not_1st 0.415821501 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12480.1     MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAK
pt032295_POPTR_ MKKKLDTRFPAVRIKKIMQTDEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAK
pt011327_POPTR_ MKKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTHEITLQRGAK
                *:*********.*******:********:***:****:************:****:****

AT3G12480.1     TVSSLHLKHCVERYNVFDFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDEVN
pt032295_POPTR_ TLNSLHLKQCVQTFNVFDFLREIVSKVPDL------GGPDVTGDERAVAKRRKVADDEDN
pt011327_POPTR_ TMSALHLKHCVQSYNVFDFLREIVSRVPDYSH----GHSDSTGDHRPLQK-RKPTGDECN
                *:.:****:**: :********:**:***       *  * * *.*.: * **  .** *

AT3G12480.1     DSDEEYKKSKTQEIGSAKTSGRGGRGRGRGRGRG---GRAAKAAEREGLNREMEVEAANS
pt032295_POPTR_ DSDEECSRNRTNETIQTSSSGR-GRGRGRGRGRGRGRGRGTRSMERETAAQHGKFE----
pt011327_POPTR_ DSDEELKRSRMHEMSHAGSSGR-GRGRGRGRGR----GRGARNIERESSSRDLEPESCTT
                ***** .:.: :*   : :*** **********    **.::  ***   :. : *    

AT3G12480.1     GQPPPEDN-----VKMHASESSPQEDEKKGIDGTAASNEDTKQHLQSPKEGIDFDLNAES
pt032295_POPTR_ ------DDPD---IDHHNDKHCPKLD-KDYEPKDSKDNIPAGRNLQAPVR--DFDLNAGL
pt011327_POPTR_ VQQSIKNNTNPGVVMDNGSES--KESVKENNRVSDATNQPER----------NFDLNAEV
                      ::     :  : .:   : . *.        *              :*****  

AT3G12480.1     LDLNETKLAPA-----------TGTTTTTTAA----------------TDSEEYSGWPMM
pt032295_POPTR_ DENGETQPVLASVPSSFSTKSDTGVPASSLTKPDTVVPASSSTKPTPELKHEEVPGWSLE
pt011327_POPTR_ NDSEDAKAAAAPAAAAPAAAATTTTTTTTTSAP------SSSVEPAAETNHEEYPGWSLS
                 :  ::: . *           * ..::: :                  . ** .**.: 

AT3G12480.1     DISKM--DPAQLASLGKRIDEDEEDYDEEG---
pt032295_POPTR_ DIEKMDINPVQLANLNTRIDEEEEDYDEEDCSY
pt011327_POPTR_ EMDKMVIDPLQLAQLSKRLDEEEEDYDEEG---
                ::.**  :* ***.*..*:**:*******.
BoxShade v3.31 C (beta, 970507) Output
AT3G12480.1     M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K S L E L F L Q D L C D R T Y E I T L E R G A K
pt032295_POPTR_    M K K K L D T R F P A V R I K K I M Q T D E D V G K I A M A V P L L V S K A L E L F L Q D L C D R T Y E I T L K R G A K
pt011327_POPTR_    M K K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K A L E L F L Q D L C D R T H E I T L Q R G A K
 
AT3G12480.1     T V S S L H L K H C V E R Y N V F D F L R E V V S K V P D Y G H S Q G Q G H G D V T M D D R S I S K R R K P I S D E V N
pt032295_POPTR_    T L N S L H L K Q C V Q T F N V F D F L R E I V S K V P D L - - - - - - G G P D V T G D E R A V A K R R K V A D D E D N
pt011327_POPTR_    T M S A L H L K H C V Q S Y N V F D F L R E I V S R V P D Y S H - - - - G H S D S T G D H R P L Q K - R K P T G D E C N
 
AT3G12480.1     D S D E E Y K K S K T Q E I G S A K T S G R G G R G R G R G R G R G - - - G R A A K A A E R E G L N R E M E V E A A N S
pt032295_POPTR_    D S D E E C S R N R T N E T I Q T S S S G R - G R G R G R G R G R G R G R G R G T R S M E R E T A A Q H G K F E - - - -
pt011327_POPTR_    D S D E E L K R S R M H E M S H A G S S G R - G R G R G R G R G R - - - - G R G A R N I E R E S S S R D L E P E S C T T
 
AT3G12480.1     G Q P P P E D N - - - - - V K M H A S E S S P Q E D E K K G I D G T A A S N E D T K Q H L Q S P K E G I D F D L N A E S
pt032295_POPTR_    - - - - - - D D P D - - - I D H H N D K H C P K L D - K D Y E P K D S K D N I P A G R N L Q A P V R - - D F D L N A G L
pt011327_POPTR_    V Q Q S I K N N T N P G V V M D N G S E S - - K E S V K E N N R V S D A T N Q P E R - - - - - - - - - - N F D L N A E V
 
AT3G12480.1     L D L N E T K L A P A - - - - - - - - - - - T G T T T T T T A A - - - - - - - - - - - - - - - - T D S E E Y S G W P M M
pt032295_POPTR_    D E N G E T Q P V L A S V P S S F S T K S D T G V P A S S L T K P D T V V P A S S S T K P T P E L K H E E V P G W S L E
pt011327_POPTR_    N D S E D A K A A A A P A A A A P A A A A T T T T T T T T T S A P - - - - - - S S S V E P A A E T N H E E Y P G W S L S
 
AT3G12480.1     D I S K M - - D P A Q L A S L G K R I D E D E E D Y D E E G - - -
pt032295_POPTR_    D I E K M D I N P V Q L A N L N T R I D E E E E D Y D E E D C S Y
pt011327_POPTR_    E M D K M V I D P L Q L A Q L S K R L D E E E E D Y D E E G - - -
 
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