fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032818 not found in 417aa AT3G12480.1 1st_1st 0.338742393 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12480.1     --------------MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDL
Sb032818_Sorbi1 GGFRRWFRRPVVGAMRKKLDTRFPAPRIKKIMQADEDVGKIALAVPVLVSKALELFLQDL
                              ***********.*************************:********

AT3G12480.1     CDRTYEITLERGAKTVSSLHLKHCVERYNVFDFLREVVSKVPDYGHSQGQGHGDVTMDDR
Sb032818_Sorbi1 CDRTYDITIRKGVKTVGSSHLKQCIQTYNVYDFLTEVVSKVPDIGPS------DVIADDK
                *****:**:.:*.***.* ***:*:: ***:*** ******** * *      **  **:

AT3G12480.1     SISKRRKPISDEVNDSDEEYKKSKTQEIGSAKTSGRGGRGRGRGRGRGGRAA--------
Sb032818_Sorbi1 -LGKRRKA---EEDGSEEELKRTR-NETESYTSNGR-GRGRGRGRGRRGRGAWREVVTTH
                 :.****.   * :.*:** *::: :*  * .:.** ********** **.*        

AT3G12480.1     ------KAAEREGLNREMEVEAANSGQPPPEDNVKMHASE-SSPQEDEKKGIDGTAASNE
Sb032818_Sorbi1 EQFAENQSSKLASLKVEVADEVSNATE----------AKEATTPVSNARASIR-------
                      ::::  .*: *:  *.:*: :          *.* ::* .: : .*        

AT3G12480.1     DTKQHLQSPKEGIDFDLNAESLDLNETKL---------APATGTTTTTTAATDSEEYSG-
Sb032818_Sorbi1 -------------NIDLNLDPTD-DEDDVTVPPQAQLSAPATSSAAATAGPGPSAAGPGP
                             ::*** :. * :* .:         ****.::::*:..  *   .* 

AT3G12480.1     -----------------WPMMDIS--KMDPAQLA-SLGKRIDEDEEDYDEEG
Sb032818_Sorbi1 SVPRSKEGAKLKDFLGAWGLPDMSNMEMDPVQFALSTNHRVEED-EDYDNED
                                 * : *:*  :***.*:* * .:*::** ****:*.
BoxShade v3.31 C (beta, 970507) Output
AT3G12480.1     - - - - - - - - - - - - - - M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K S L E L F L Q D L
Sb032818_Sorbi1    G G F R R W F R R P V V G A M R K K L D T R F P A P R I K K I M Q A D E D V G K I A L A V P V L V S K A L E L F L Q D L
 
AT3G12480.1     C D R T Y E I T L E R G A K T V S S L H L K H C V E R Y N V F D F L R E V V S K V P D Y G H S Q G Q G H G D V T M D D R
Sb032818_Sorbi1    C D R T Y D I T I R K G V K T V G S S H L K Q C I Q T Y N V Y D F L T E V V S K V P D I G P S - - - - - - D V I A D D K
 
AT3G12480.1     S I S K R R K P I S D E V N D S D E E Y K K S K T Q E I G S A K T S G R G G R G R G R G R G R G G R A A - - - - - - - -
Sb032818_Sorbi1    - L G K R R K A - - - E E D G S E E E L K R T R - N E T E S Y T S N G R - G R G R G R G R G R R G R G A W R E V V T T H
 
AT3G12480.1     - - - - - - K A A E R E G L N R E M E V E A A N S G Q P P P E D N V K M H A S E - S S P Q E D E K K G I D G T A A S N E
Sb032818_Sorbi1    E Q F A E N Q S S K L A S L K V E V A D E V S N A T E - - - - - - - - - - A K E A T T P V S N A R A S I R - - - - - - -
 
AT3G12480.1     D T K Q H L Q S P K E G I D F D L N A E S L D L N E T K L - - - - - - - - - A P A T G T T T T T T A A T D S E E Y S G -
Sb032818_Sorbi1    - - - - - - - - - - - - - N I D L N L D P T D - D E D D V T V P P Q A Q L S A P A T S S A A A T A G P G P S A A G P G P
 
AT3G12480.1     - - - - - - - - - - - - - - - - - W P M M D I S - - K M D P A Q L A - S L G K R I D E D E E D Y D E E G
Sb032818_Sorbi1    S V P R S K E G A K L K D F L G A W G L P D M S N M E M D P V Q F A L S T N H R V E E D - E D Y D N E D
 
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