fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016746 not found in 292aa AT3G12480.1 1st_1st 0.476673427 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12480.1     MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAK
gm016746_Glyma0 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEVTLQRGAK
                *************************************:**************:**:****

AT3G12480.1     TVSSLHLKHCVERYNVFDFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDEVN
gm016746_Glyma0 TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHGHGHSEAGADDRALPKRRKAVGDDGN
                *:.********: *.******::**:******.:*:**.:.  ***::.****.:.*: *

AT3G12480.1     DSDEEYKKSKTQEIGSAKTSGRGGRGRGRGRGRGGRAAKAAEREGLNREMEVEAANSGQP
gm016746_Glyma0 DSDEEAKRSKMRELGHTGTPGR-GRGRGRGRGR-GRGARTIERDICHQQVESEPCTS---
                ***** *:** :*:* : *.** ********** **.*:: **:  ::::* *...*   

AT3G12480.1     PPEDNVKMHASESSPQEDEKKGIDGTAASNEDTKQHL----QSPKEGIDFDLNAESLDLN
gm016746_Glyma0 ------ILQSSNDIP--NTSVPIDNGPQSKELPKENFVISEESTQSFRNIDLNA-NLNEN
                       :::*:. *  : .  **. . *:* .*:::    :*.:.  ::**** .*: *

AT3G12480.1     ETKLA----PAT---GTTTTTTAATDSEEYSGWPMMDISKM--DPAQLASLGKRIDEDEE
gm016746_Glyma0 EDKNAGTAVPASLPEPTSMDTAMEIKHEEIPGWSLSDVDKMGIDTMQLANLGSRLEEDEE
                * * *    **:    *:  *:   . ** .**.: *:.**  *. ***.**.*::****

AT3G12480.1     DYDEEG
gm016746_Glyma0 DYDEEG
                ******
BoxShade v3.31 C (beta, 970507) Output
AT3G12480.1     M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K S L E L F L Q D L C D R T Y E I T L E R G A K
gm016746_Glyma0    M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K A L E L F L Q D L C D R T Y E V T L Q R G A K
 
AT3G12480.1     T V S S L H L K H C V E R Y N V F D F L R E V V S K V P D Y G H S Q G Q G H G D V T M D D R S I S K R R K P I S D E V N
gm016746_Glyma0    T M N S L H L K H C V Q S Y S V F D F L R D I V S R V P D Y G H G H G H G H S E A G A D D R A L P K R R K A V G D D G N
 
AT3G12480.1     D S D E E Y K K S K T Q E I G S A K T S G R G G R G R G R G R G R G G R A A K A A E R E G L N R E M E V E A A N S G Q P
gm016746_Glyma0    D S D E E A K R S K M R E L G H T G T P G R - G R G R G R G R G R - G R G A R T I E R D I C H Q Q V E S E P C T S - - -
 
AT3G12480.1     P P E D N V K M H A S E S S P Q E D E K K G I D G T A A S N E D T K Q H L - - - - Q S P K E G I D F D L N A E S L D L N
gm016746_Glyma0    - - - - - - I L Q S S N D I P - - N T S V P I D N G P Q S K E L P K E N F V I S E E S T Q S F R N I D L N A - N L N E N
 
AT3G12480.1     E T K L A - - - - P A T - - - G T T T T T T A A T D S E E Y S G W P M M D I S K M - - D P A Q L A S L G K R I D E D E E
gm016746_Glyma0    E D K N A G T A V P A S L P E P T S M D T A M E I K H E E I P G W S L S D V D K M G I D T M Q L A N L G S R L E E D E E
 
AT3G12480.1     D Y D E E G
gm016746_Glyma0    D Y D E E G
 
0